Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0533 |
Symbol | |
ID | 4617822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 494877 |
End bp | 496082 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639783623 |
Product | translation-associated GTPase |
Protein accession | YP_930054 |
Protein GI | 119872047 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.626339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0197443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGACTC AAGCCAGAGT ACAGATAGGC ATTGTAGGCA AGCCAAACGC CGGCAAATCA ACTTTTTTTG CAGCAGCAAC TCTAAAAGAT GTCAAGATTT CTCCCATACC ATTTACCACA ATAGATCCTA ACATAGGCAT TGGATATGTA AGAATAGAGA CATGCCCCTG TACAAACATT AGATGTAACC CCAGAAGCTA CATAGTGCTT GACGGCGTGT GTTTTGCGCC AGTGGAGTTA ATAGATGTAG CTGGGCTCGT CCCTGGCGCG TGGCAAGGGA GGGGGTTGGG AAACCAGTTT CTAGACCACT TAAGGAGAGC CCCCGTCCTT ATACACGTCG TAGACGCCTC AGGGTCTACA GACGAAGAAG GTAGGCTTGT TAAACCGGGG TCTCACGACC CTGTCTCAGA CGTTTATTTC CTTGAGAGAG AGATAGATAT GTGGATTGCA TCTATACTCC GTAGGGACTG GGACAGGGTT GTTCGTTATG TCGAGTTTAG CAAAAGAGAC ATAACTGAAG TTCTGTTAGA GAAACTAGCT GGGTTAGGTA TGGGGCGGGC ACACGTAGAG GCAGCGCTTC AAGATGCAGA CCTAGCGAAA AAATCTCCAA GCAAATGGAG TGACGAAGAC CTCGTAAAAT TTAGCCACTT AGTTAGAGAA TACAGCAAGC CTATTGTAAT AGCGGCAAAT AAAATCGACC TTCCAGAGGG CGAAGAGGGG TATAAAAAAC TAAGAGAGAC GCTTCCTAAT AGAATCATTG TGCCCACATC CGCCGAGGCT GAATTGGCCT TAAGACGGGC GGCGGCAAAA GGGCTTATTA AATACAAGCC AGGCGACCAG AGTTTCGAAG TAGTGGGCCA GCTAACGCCA CAACAAAAAT CGGCGTTAGA CAAAATAGCG GAATTATTAA AGAAGTGGGG TTCGACAGGC GTGACCAAAG CTATCAACGC TGCAGTATTC GATGCAATAA AATACGTGGC AATTTATCCC GTTGAAGATG AAAGAAGGTT AAGTGATAAG AACGGCAACG TTTTACCGGA TTTATTGCTA GTGCCGCATA CATACACCGC AAGAGATGTC GCTTATGCTA TACATACGGA ACTTGGCGAA AGATTTATCG CAGCAATTGA TGTAAAAAGC GGAAGAAAGT TGGCCGCAGA TGAGACAGTT TTTCAAGGCC TAATTATAAA AATACTCGCC AGATGA
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Protein sequence | MVTQARVQIG IVGKPNAGKS TFFAAATLKD VKISPIPFTT IDPNIGIGYV RIETCPCTNI RCNPRSYIVL DGVCFAPVEL IDVAGLVPGA WQGRGLGNQF LDHLRRAPVL IHVVDASGST DEEGRLVKPG SHDPVSDVYF LEREIDMWIA SILRRDWDRV VRYVEFSKRD ITEVLLEKLA GLGMGRAHVE AALQDADLAK KSPSKWSDED LVKFSHLVRE YSKPIVIAAN KIDLPEGEEG YKKLRETLPN RIIVPTSAEA ELALRRAAAK GLIKYKPGDQ SFEVVGQLTP QQKSALDKIA ELLKKWGSTG VTKAINAAVF DAIKYVAIYP VEDERRLSDK NGNVLPDLLL VPHTYTARDV AYAIHTELGE RFIAAIDVKS GRKLAADETV FQGLIIKILA R
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