Gene Pisl_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0533 
Symbol 
ID4617822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp494877 
End bp496082 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content46% 
IMG OID639783623 
Producttranslation-associated GTPase 
Protein accessionYP_930054 
Protein GI119872047 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.626339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0197443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACTC AAGCCAGAGT ACAGATAGGC ATTGTAGGCA AGCCAAACGC CGGCAAATCA 
ACTTTTTTTG CAGCAGCAAC TCTAAAAGAT GTCAAGATTT CTCCCATACC ATTTACCACA
ATAGATCCTA ACATAGGCAT TGGATATGTA AGAATAGAGA CATGCCCCTG TACAAACATT
AGATGTAACC CCAGAAGCTA CATAGTGCTT GACGGCGTGT GTTTTGCGCC AGTGGAGTTA
ATAGATGTAG CTGGGCTCGT CCCTGGCGCG TGGCAAGGGA GGGGGTTGGG AAACCAGTTT
CTAGACCACT TAAGGAGAGC CCCCGTCCTT ATACACGTCG TAGACGCCTC AGGGTCTACA
GACGAAGAAG GTAGGCTTGT TAAACCGGGG TCTCACGACC CTGTCTCAGA CGTTTATTTC
CTTGAGAGAG AGATAGATAT GTGGATTGCA TCTATACTCC GTAGGGACTG GGACAGGGTT
GTTCGTTATG TCGAGTTTAG CAAAAGAGAC ATAACTGAAG TTCTGTTAGA GAAACTAGCT
GGGTTAGGTA TGGGGCGGGC ACACGTAGAG GCAGCGCTTC AAGATGCAGA CCTAGCGAAA
AAATCTCCAA GCAAATGGAG TGACGAAGAC CTCGTAAAAT TTAGCCACTT AGTTAGAGAA
TACAGCAAGC CTATTGTAAT AGCGGCAAAT AAAATCGACC TTCCAGAGGG CGAAGAGGGG
TATAAAAAAC TAAGAGAGAC GCTTCCTAAT AGAATCATTG TGCCCACATC CGCCGAGGCT
GAATTGGCCT TAAGACGGGC GGCGGCAAAA GGGCTTATTA AATACAAGCC AGGCGACCAG
AGTTTCGAAG TAGTGGGCCA GCTAACGCCA CAACAAAAAT CGGCGTTAGA CAAAATAGCG
GAATTATTAA AGAAGTGGGG TTCGACAGGC GTGACCAAAG CTATCAACGC TGCAGTATTC
GATGCAATAA AATACGTGGC AATTTATCCC GTTGAAGATG AAAGAAGGTT AAGTGATAAG
AACGGCAACG TTTTACCGGA TTTATTGCTA GTGCCGCATA CATACACCGC AAGAGATGTC
GCTTATGCTA TACATACGGA ACTTGGCGAA AGATTTATCG CAGCAATTGA TGTAAAAAGC
GGAAGAAAGT TGGCCGCAGA TGAGACAGTT TTTCAAGGCC TAATTATAAA AATACTCGCC
AGATGA
 
Protein sequence
MVTQARVQIG IVGKPNAGKS TFFAAATLKD VKISPIPFTT IDPNIGIGYV RIETCPCTNI 
RCNPRSYIVL DGVCFAPVEL IDVAGLVPGA WQGRGLGNQF LDHLRRAPVL IHVVDASGST
DEEGRLVKPG SHDPVSDVYF LEREIDMWIA SILRRDWDRV VRYVEFSKRD ITEVLLEKLA
GLGMGRAHVE AALQDADLAK KSPSKWSDED LVKFSHLVRE YSKPIVIAAN KIDLPEGEEG
YKKLRETLPN RIIVPTSAEA ELALRRAAAK GLIKYKPGDQ SFEVVGQLTP QQKSALDKIA
ELLKKWGSTG VTKAINAAVF DAIKYVAIYP VEDERRLSDK NGNVLPDLLL VPHTYTARDV
AYAIHTELGE RFIAAIDVKS GRKLAADETV FQGLIIKILA R