Gene Pisl_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0531 
Symbol 
ID4618331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp493970 
End bp494383 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content42% 
IMG OID639783621 
Producthistidine triad (HIT) protein 
Protein accessionYP_930052 
Protein GI119872045 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.406416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0183035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGTA TATTTTGTAA AATAGTGAGA GGGGAGGCAC CTGCGTGGAA AGTATATGAA 
GATGGAGAGT TCATAGTTAT ATTAGACAAA TATCCAGCAT CCTATGGGCA TCTACTTGTG
GTATCGAAAG AACACTATAC TAATGTAATA GATGCCCCAG TGGAGAAAGT TGTTAAAGGT
TTTGAGATAG CCACAAAGCT TGCAAAAGCT TGGGCTAAGT TAGGAGCTCC TGGTGTAAAC
ATAGTAACAA ACGCAGGGCG TGACGCAGGT CAAATGGTAT ATCACCTACA TATACATGTG
ATCCCCAGAT GGGGCGGCAA GTTGACGTGG CATGGGAGAG AGGAGATTAG AGAGGAAGAG
GCTAGGGAAG TTGTAGAAAA ACTTCAAAGA GTATTACCAG AGTATTTTAA GTAG
 
Protein sequence
MDCIFCKIVR GEAPAWKVYE DGEFIVILDK YPASYGHLLV VSKEHYTNVI DAPVEKVVKG 
FEIATKLAKA WAKLGAPGVN IVTNAGRDAG QMVYHLHIHV IPRWGGKLTW HGREEIREEE
AREVVEKLQR VLPEYFK