Gene Pisl_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0524 
Symbol 
ID4617171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp487027 
End bp487764 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content41% 
IMG OID639783614 
Producthypothetical protein 
Protein accessionYP_930045 
Protein GI119872038 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5494] Predicted thioredoxin/glutaredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0749917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA TAGTAATTCA CCACACATGT AAGTCGTCAT ATGTATTATA CAAAGCCCTC 
AGGGGTGTGC CAGGTATAAC TTTTGAAATG GTGGGCACGT TGTATTTCCC ATATCTCAAA
CGTTACGTAT TGAGTGTGCC TGCAGTTTTT GCTAATGGGA AACTTGTATT AGTAGACCCG
GTAGAGCCAG GCGATGTAAT TGCTCTAAAA GATGGCAGAA CAAAGAAGGA GCTTGACATA
GAAGAGGCTA TAGAAAACTT TGTAAGAGGT ATAATGGCGA GTCAAGCTAT TTTAACAGCT
GTTATGTTGT ATAAATCTCT CAAGCCTGTG CTAGATCCTG AGCTTGTCGC AGTGCTTTCC
AGAGCGAGAT ATCATGAACA AGAAGACAAA ATTGGTCAGA TTGTACATAA ATTACAGGAG
AGAGGAGAGG AGCTTTTGCA AGAACACTGG GAGAGTTTTA TCAAGTTGCT AACTTTTGGA
CTTGTTAGAG AGCTGTATTG GCTCGGCATT GATATAAACG AGCTAGAGAT TAGCCATATA
AAAATGTGGC TATTAGCAAA AGCTACATTA GGCAGATTGG GTTTGCCATA CCCAAAGCCA
TCAGTGCCAG ACGATGTGGC TACTGCGGTG TATGCCACAT TGAAAGAGTC AGGCCAGAGA
TATATGGACA AGATAGCCGA GGAGCAAAAC ATCATTGCTA CAGACAGAGA GTTTCTCGCA
TTAATACAGG AATATTGA
 
Protein sequence
MIKIVIHHTC KSSYVLYKAL RGVPGITFEM VGTLYFPYLK RYVLSVPAVF ANGKLVLVDP 
VEPGDVIALK DGRTKKELDI EEAIENFVRG IMASQAILTA VMLYKSLKPV LDPELVAVLS
RARYHEQEDK IGQIVHKLQE RGEELLQEHW ESFIKLLTFG LVRELYWLGI DINELEISHI
KMWLLAKATL GRLGLPYPKP SVPDDVATAV YATLKESGQR YMDKIAEEQN IIATDREFLA
LIQEY