Gene Pisl_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0519 
Symbol 
ID4617655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp483331 
End bp483996 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content44% 
IMG OID639783609 
ProductB3/4 domain-containing protein 
Protein accessionYP_930040 
Protein GI119872033 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.015821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0554264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTA TTTTAAACGA GGTAAAAAGC TTGGGAGTTT TCGTAGCTTA TGACGTAGTA 
TATGGGGTAG ACAATACGAG ATATACGTCG CAACTTGAAG AAGAGATTAA TAGAATCGTG
GAAGAGATTA GAGGGGCTCT CTCTTTAGAA ACGCTAAAAG ATCACCACAT AATTAGAGCG
TATCGCGACT TCTATTGGAA GACTCTTAAA ATAGATCCAA CAAAGCAACG GCCTGCGCAA
GAGGCCCTCC TCAGGAGAGT GTTGCGCGGG GAGTCTCTGC CGAGGATAAA CCCCGTTGTA
GATGCTGGAA ATGCCATATC AATAAAATAT ATAGTGCCCA TAGGGCTTTA TGACATTTCG
AAGATCCACG GAAAAACCCT TCGCATTAGG CTGTCAAGAA AAGGAGAGGT CTTCCACCCG
ATAGGAGGTC AGCCGCATGA GCTAGATGAT CAGATAGTCC TTGCGTCAAA TGACCAAATA
CTCCATGTGT ATCCATATAG GGATAGTGTA GAGACAAAAA TAGACGTGTC AACAAAAGAC
GTGTTAATCG TAGTGGCAGG AGTTCCGGGA GTTGAGGAGG AGCGGTTAAT AAATGCAACG
TTACACCTCC GCAGACTTTT ATCGCTTTTG GGAGGTGTCG CCGATGGCGA TGTGAGATTA
GCTTAA
 
Protein sequence
MITILNEVKS LGVFVAYDVV YGVDNTRYTS QLEEEINRIV EEIRGALSLE TLKDHHIIRA 
YRDFYWKTLK IDPTKQRPAQ EALLRRVLRG ESLPRINPVV DAGNAISIKY IVPIGLYDIS
KIHGKTLRIR LSRKGEVFHP IGGQPHELDD QIVLASNDQI LHVYPYRDSV ETKIDVSTKD
VLIVVAGVPG VEEERLINAT LHLRRLLSLL GGVADGDVRL A