Gene Pisl_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0517 
Symbol 
ID4618100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp482050 
End bp482895 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content48% 
IMG OID639783607 
Producthypothetical protein 
Protein accessionYP_930038 
Protein GI119872031 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0112529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0461896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACCAA GAGTACGGAG TTACATACCT GGGCTCGACG AAATTTTATA CGGCGGTATA 
CCAGAGAGAA GCGTTGTTTT ATTAAGCGGA GGGCCGGGGA CAGGCAAGTC TATACTTGGC
AAACAATTTC TCTATAACGG TTTAAAAAGG GGAGAGCCAG GCGTTTTTGT AGCACTTGAA
GAACACCCCG TTGCCGTCCG CCGTAGCTTT CGCCACTTTG GATGGGATAT TTCTCAATAT
GAGCGCGAGG GGAAATTTGC AATAATAGAC GCGTTTACGG GTGGCGTCGG TACTGCGGCA
CAACGGGAAA AATACATAGT GAAGCAGGTA GACGACGTCT ATGAATTAAG CGATGTGTTG
AGACAAGCAA TTAAAGACAT CGGCGCTCGT CGCGTGGTAA TAGATTCAGT ATCTACCCTC
TACTTAACAA AACCAGCTGT GGCTAGGGCT ACGATTATGA CACTAAAGAG AGTTATAGCA
GGTCTTGGAT GTACTGCGTT TTTCGTATCT CAAGTCTCGG TGGGAGAACG CGGTTTTGGC
GGCCCCGGCG TAGAACACGC AGTAGACGGC ATAATCCGTC TCGACTTAGA CGAGATAGAC
GGCAAGTTAC ACAGGTCGAT CATTGTGTGG AAAATGCGAG ATACAAAACA CTCGATGTTG
CGCCACCCCA TGGAGATAAA AGACGGCGGG ATAGAGGTGA TGTGGGACAG ATATCTAAAG
ATTGTAGGAA ATACCGTTAA AATAGAGCCG ATCTCTAAGG AGGAGGTAGA GGCTATGCGA
AAGGCTGTGG AAGAGGCCGA GAAACAGCCA GCTCAGAGAA AAGTTGAAAT AGAGGTGGAG
GATTAG
 
Protein sequence
MVPRVRSYIP GLDEILYGGI PERSVVLLSG GPGTGKSILG KQFLYNGLKR GEPGVFVALE 
EHPVAVRRSF RHFGWDISQY EREGKFAIID AFTGGVGTAA QREKYIVKQV DDVYELSDVL
RQAIKDIGAR RVVIDSVSTL YLTKPAVARA TIMTLKRVIA GLGCTAFFVS QVSVGERGFG
GPGVEHAVDG IIRLDLDEID GKLHRSIIVW KMRDTKHSML RHPMEIKDGG IEVMWDRYLK
IVGNTVKIEP ISKEEVEAMR KAVEEAEKQP AQRKVEIEVE D