Gene Pisl_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0516 
Symbol 
ID4618168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp480686 
End bp482014 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content47% 
IMG OID639783606 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_930037 
Protein GI119872030 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0503497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0605456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTATA TGCCGATGAC AGAATCTAAG GTAAAAGATC TCTCGCTAGC CGAAAGAGGT 
AGGGAACAGT TGTACTGGGC TGAGAGAAAT ATGCCCGTAT TGTTAGAAAT TAGGAAGCGT
TTTGAAAAAG AGAAACCTCT TGCAGGTCAG ACGATAGCCG CTTGTTTACA TGTCACAAAA
GAGACAGGAG TTCTAGTACG TACTTTAATC GCAGGAGGAG CGCGAGTTGT AGTTATACCA
TCTAACCCTC TTTCAACTCA AGATGATGTA GCCGCCGCTT TGGCACAAGA AGGCGCATAT
GTCTACGCAT GGCGTGGGAT GTCTGAACGA GATTATTACA ATGCCATTGG TTTCGCGTTG
TCTTTTTACC CCACGATTAC TCTAGACGAC GGTGCAGACC TAACAGTGAC AATACATAAG
CTTAAGCATG AAGCACGAGA CAAGACAATT GAGTACGTAC TAGAGACTGC GGGGTCTATA
GACCCCGATA AATTAGTGGC CGGACTCCGC GGGGGCACCG AGGAGACCAC CACAGGTGTG
TTAAGGCTCC GCGCGCTGAA GAGGGCTGGA AAGCTTCTCT ACCCAATCAT AGCAGTTAAC
GAGTCCTATA CGAAGTATCT ATTTGACAAC AGATATGGAA CAGGCCAGTC CACTTGGGAC
GGCGTCTTGA GGGCAACAAA CCTCCTCATA GCCGGCAAAA ACGTGGTTAT TGCCGGGTAT
GGTTGGGTTG GCAGAGGAAT CGCAATGAGG GCTAGAGGCC TCGGCGCAAG GAGAGTAATT
GTGGTAGAGG TAGACCCCGT GAGGGCTCTG GAGGCTGTCT TTGACGGGTT TGAAGTTATG
CCTATGGACA AGGCAGCTGA GATAGGCGAT ATATTTATAA CAGCCACGGG CAATATAAGA
GCAATAAATC TAGGCCATAT TTTTAAGATG AAAGACGGCG CAGTTCTCGC AAACGCTGGT
CACTTTAATG TAGAAATCGA CGTCGCAGGT CTTGAACGTG TAGCAATCTC AAAGAAGTTA
ATAAGACAGT ACCTAGAGGA ATACACGCTA CCAAATGGCA AACGTGTCTA TCTCATCGGG
GAGGGCCGGC TAGTGAATTT GGTAGCCGCA GAGGGCCATC CCTCTGAGGT CATGGATCTA
TCTTTTGCAA ACCAAGCCCT CGCCGCCGAG CATATTGTAA AAAATAAGCT AGCTATTGAC
GTCTATAAAT TACCCGACGA ACTTGACCGC GAAGTAGCGC GGCTTAAGCT CAAAACTATG
GGTATCGAAA TAGAAGAATT AACCGAAGAA CAGAAACAAT ATCTCACCTC CTGGGAGTTG
GGCACGTAA
 
Protein sequence
MFYMPMTESK VKDLSLAERG REQLYWAERN MPVLLEIRKR FEKEKPLAGQ TIAACLHVTK 
ETGVLVRTLI AGGARVVVIP SNPLSTQDDV AAALAQEGAY VYAWRGMSER DYYNAIGFAL
SFYPTITLDD GADLTVTIHK LKHEARDKTI EYVLETAGSI DPDKLVAGLR GGTEETTTGV
LRLRALKRAG KLLYPIIAVN ESYTKYLFDN RYGTGQSTWD GVLRATNLLI AGKNVVIAGY
GWVGRGIAMR ARGLGARRVI VVEVDPVRAL EAVFDGFEVM PMDKAAEIGD IFITATGNIR
AINLGHIFKM KDGAVLANAG HFNVEIDVAG LERVAISKKL IRQYLEEYTL PNGKRVYLIG
EGRLVNLVAA EGHPSEVMDL SFANQALAAE HIVKNKLAID VYKLPDELDR EVARLKLKTM
GIEIEELTEE QKQYLTSWEL GT