Gene Pisl_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0496 
Symbol 
ID4616528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp462601 
End bp463950 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content47% 
IMG OID639783584 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_930017 
Protein GI119872010 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAG ACCTCTTAAA GAGGGGTGAG TTAACAATAG CGATCTACGG CTTGGGCTAT 
GTAGGACTTG CGCTGTCTGC GGCGTGGGTG CTTGCGGGAG CTAGGGTTAT CGGCGTTGAC
GTAGATCTTT CAAAAGTAGA GAAGTTGAAC GGAGGCGTGG TGGAATTTCC AGAAACCGAC
GTTGTTGAGA CTCTCACATC GGCTATAAAG AGCGGTAAAT TTCAGGCGAC TACCGATGGA
ATAATAGCCT CTATTAGGAG CAATGTTAAG ATAATTGCGG TGCCTGTCTA CCTTAAGAAG
TCACCTATTG CAGTAGAGGT AGACTTTTCG GCCTTAACAT CCGCAAGCAG AGCTATAGGC
GCTGGTCTTA AGAGGGGAGA CTTAGTCATT GTAGAGTCTA GCGTTCCGCC AGGTACAACA
GAAGATGTAG TAAAGCCTAT ACTAGAGGGG GTCTCAGGTC TTGTCGCAGA AGAAGATTTC
TACCTAGCCT ACAGCCCAGA ACGTATCATG GTTGGCCATG CGCTGCGGGA TATTACAGAA
AACTACCCTA AAATAGTCGC CGGAATTGGG CCTAGAAGTA CAGAGGAGGC TGCGGAACTA
TATAGACTTA TATCTAAAAA GGGCGTTATA ACATTACGGA ATGTAAAAGA GGCAGAATTC
GAAAAACTCC TAGAGGGCGT ATATAGAGAT GTCAATATTG CATTAGCTAA TGAAATGGCC
AAACTAGCAA ATGCCATGGG GATTTCTTTT AGAAGGGCTC GAGAGGCGGC AAACAGCCAG
CCATATAGCC ACGTACATAA GCCTGGCACT GGCGTGGGGG GCAATTGCAT ACCGGTCTAT
CCATACTTCT TAATGTGGAC TGCGGCGAAA TACGGCGTAG AGTTACGACT GACATATCTC
GCTAGGCAGA TAAATGAAAG ACAGCCAGAG GAGGTGGCGT TTGCAACACT CCGCGCCATG
TTAAAACACG GCATTAACCC TGCTACGGCA AAAATAACGA TATTGGGGCT CGCGTTTAGG
GGGGATGTCG ATGATTCTCG TGAGAGTCCC ACCTATGGCG TAATAGCAAC GTTGCTTAAG
CTTGGTATTA AACCTACACA GATTGTGGTA CACGACCCAT ATATAAGGCA AGACCGTCAA
TTATCCACGT GGGGCGTTGT GCTTACACAA GACCTAGAAG TTGCTGTAAA GGGGGCGGAC
ATAGTAGTAG TGTCTACAGA TCACTCTATG TACCGTATAG AGGCAAGCAA GATCGCTAAA
TACATGAAGA CCCCTGTGGT TATAGACGCC AGAGGTGTAT TAATACCAGA TATGGAGATC
TACGCGATAG ACTCGGGGAA TTGGCCCTAA
 
Protein sequence
MLADLLKRGE LTIAIYGLGY VGLALSAAWV LAGARVIGVD VDLSKVEKLN GGVVEFPETD 
VVETLTSAIK SGKFQATTDG IIASIRSNVK IIAVPVYLKK SPIAVEVDFS ALTSASRAIG
AGLKRGDLVI VESSVPPGTT EDVVKPILEG VSGLVAEEDF YLAYSPERIM VGHALRDITE
NYPKIVAGIG PRSTEEAAEL YRLISKKGVI TLRNVKEAEF EKLLEGVYRD VNIALANEMA
KLANAMGISF RRAREAANSQ PYSHVHKPGT GVGGNCIPVY PYFLMWTAAK YGVELRLTYL
ARQINERQPE EVAFATLRAM LKHGINPATA KITILGLAFR GDVDDSRESP TYGVIATLLK
LGIKPTQIVV HDPYIRQDRQ LSTWGVVLTQ DLEVAVKGAD IVVVSTDHSM YRIEASKIAK
YMKTPVVIDA RGVLIPDMEI YAIDSGNWP