Gene Pisl_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0491 
Symbol 
ID4617979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp459428 
End bp460420 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content41% 
IMG OID639783579 
ProducteRF1 domain-containing 1 protein 
Protein accessionYP_930012 
Protein GI119872005 
COG category[R] General function prediction only 
COG ID[COG1537] Predicted RNA-binding proteins 
TIGRFAM ID[TIGR00111] probable translation factor pelota 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATATG AAGTAGATAC GAAGCGCAGG ATTATAAAAC TGGTGCCTGA AAGAGAAGAA 
GACTTATACT TCATCTACCT ACTTATAGAC AAGGGAGATA TCATAAGGGG ATGGACGGTT
AGAGAGTATA AGCCAGATGG CGTAAAAGAA GGCGAAAGAA TCAAGATATA TCTAGCCATA
AAGGTAGAGT CTTTAGAGTA TCACAAGTTT CGCGGTAGTT TAAGAATTAG GGGGACTGTT
GTCGAAGTGC AAGACGGCAT CGAGGGGGTA AAGGGCAGAA GACATACCTT TGATGTAACT
CCAGGGAGGG AGATAGAAAT AGAAAAGGCA TACGACTATC CCTTAGACGT CGTGATAGAA
GTTCTTAACA TGGCAAAAGC AGTATTGCCA AGGGTTTTGC TGATATCTGT TGATGATGAA
GAAACCGTTT TTGCATATAT AACGGCGCTA GGAGTAGAAA TCCTACATAC TATGTATAAC
ACTGGTAGGA AAGACGATAG CATGTTTGAA GAGTACTTTA CTGCTATTAA AGAGGTTGTA
GACGAGTTAA AACGACGTCA TAAGCCCGAC ATAGTCGTAT TGGCAGGACC TAGTATGATA
ATAGAACAAG CAAGTGAGTA TATACAGGCA ATAAAAGTAC CGCAGGGCTC TGGCGGTCTT
GCAGGTGTTT ATGAATTCAT TAGAGGCGGT CTCTATGAGA AGTTTAAAAT TGAAATGGGG
ATAAATGTAT ATCAGCGATT TATACACAAA CTGTCAGTAG ACAGACTCTC TGTGGCAATA
GGTTTAAACG AAGTTAGAGA AGCTACCGAT GCCGGTCGCA TAGAGACTGT GCTAGTGCTA
GACACGTTGA TTAAAGAAAG ACCTGAAGAT ATATGGCCCC TTCTTGCTCA GGTATATAAG
ACGCGGGGCA AAATCCACAT AGTTAAAGAG GATAGCGAAG TAGGAGCAGG ACTAAAAGCT
ATGGGAGGAG TAGTTGCATT ATTAAGGTGG TGA
 
Protein sequence
MRYEVDTKRR IIKLVPEREE DLYFIYLLID KGDIIRGWTV REYKPDGVKE GERIKIYLAI 
KVESLEYHKF RGSLRIRGTV VEVQDGIEGV KGRRHTFDVT PGREIEIEKA YDYPLDVVIE
VLNMAKAVLP RVLLISVDDE ETVFAYITAL GVEILHTMYN TGRKDDSMFE EYFTAIKEVV
DELKRRHKPD IVVLAGPSMI IEQASEYIQA IKVPQGSGGL AGVYEFIRGG LYEKFKIEMG
INVYQRFIHK LSVDRLSVAI GLNEVREATD AGRIETVLVL DTLIKERPED IWPLLAQVYK
TRGKIHIVKE DSEVGAGLKA MGGVVALLRW