Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0486 |
Symbol | |
ID | 4616635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 456140 |
End bp | 457075 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639783572 |
Product | Rad51-like protein |
Protein accession | YP_930007 |
Protein GI | 119872000 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.100378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGGA AGAAAGCCGA TTTATCTTCG CTTGAGGGCG TGGGTCCTAA GACGTTTGAA AAGCTAATGG AGTTGGGTAT TACATCTCTA GAACATCTAT CTGAATTTAC GGCGGAGGAG TTAGCTGAGG CAGGTATCGA ATATGAAAGA GCTGTAAAGC TTCTACAGCA AGTTTTGCAA AAAGTCGGCG GGGTGAAGGC GGTGACATTT GGCGAGTTTA GACAGAGACA AGTCAAGACT TTTAAGACTG GGCTTGTAGA ATTTGACGAA AAAACTCCTT GGAGAGGGAT AAGGGAGGGC TTTATATATG AATTTGCTGG CGAATATGGC ACTGGTAAGT CAATGTTTGC ACATCAACTT GCCGTGGTAG GACTTAAGGA GGGTTTTACT GCGAGAGTTG TATATATAGA TACAGAGGGC ACGTTTAACC CAACGCTCGT CGAGACAATT GCGAGGCGGT TTGGTGTAGA AATTGAGAGA TTAGACACGT CGCTTGTTTT ATATCAACCG GCTAATGTAA TGCAGTTAGA ACAGATAGTG AAATACGACA TCCCACGCCA TATACAAGAG GGTTGCCGTC TTGTGATAAT AGATACAATC ACGGCGTTGT ATCGTGCTGA GTTTCCCGGT AGGGAGATGT TGGCGGCTAG ACAACAGCGA ATTCACTATC TCGTCGATTG GCTGAGACGC CATGCGAGGA CGTTCGGCGT AACTTCTATT TTGGCAAATC AAGTGATGGA CGTGCCCGAG ATTTTTGCCG GCGGCGTGAA AAGGCCGGCG GGCGGCAACG TCTTGGCACA TACCGTAAAC GCGAGATTTA TGATGGTGCG GCCTAACAAG GCGAAGCTAG AGGGTTACAT GTGGCCATTA GACGTGCCTG GTATGGCTCC TGACGTAAGG ATAGAGTACA GAATTACGGA AGCCGGGCTT GAATAG
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Protein sequence | MSRKKADLSS LEGVGPKTFE KLMELGITSL EHLSEFTAEE LAEAGIEYER AVKLLQQVLQ KVGGVKAVTF GEFRQRQVKT FKTGLVEFDE KTPWRGIREG FIYEFAGEYG TGKSMFAHQL AVVGLKEGFT ARVVYIDTEG TFNPTLVETI ARRFGVEIER LDTSLVLYQP ANVMQLEQIV KYDIPRHIQE GCRLVIIDTI TALYRAEFPG REMLAARQQR IHYLVDWLRR HARTFGVTSI LANQVMDVPE IFAGGVKRPA GGNVLAHTVN ARFMMVRPNK AKLEGYMWPL DVPGMAPDVR IEYRITEAGL E
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