Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0482 |
Symbol | |
ID | 4617369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 452529 |
End bp | 453098 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783567 |
Product | hypothetical protein |
Protein accession | YP_930003 |
Protein GI | 119871996 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.215693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGG TAGGAAGACT TGCGTTGTGG ATAATGATGT ACATTGTTGT AATGGCTGTT GTACAATACG CTTTCCAATT TGTAACTAGT AACATATATA AAGATGCGAT GAGCTACAAG GTCTACGTCG ATATTCTACT CACTCTATTC TTTGGGTGGC AGATTGTAAA AGCGTTTGCA GATATTGTGG CGTTGCCTGT TGCTAAAAAA CAGGGAGAGA CCGCCGGAAA GGCTGTGGCA AATCTAATAA AACTTTTGGG CATAGGCGCT CTGGTAGCAT CTCTAGCAGG CGCCGTCTCT GGCGGCGCCG CTGCGGCGGC TTTAGGCGGT TTTATCGGAT TGGTAATAGG CTTTGCAACT CAGCAAGTGC TTAGCCAAGC GGTAGCCGGC ATCTTTCTAC TTCTCGCAAG GCCGTTTAAA ATTGGCGACA AAATTGTAGG CGCCGGCCAA GAAGGCATAG TCGAAGACAT AGGCGCTATG TACACTGTTG TTAAAGATGC CGAGGGTAAC AAGATCTTAA TACCTAACAA CAAACTAATA GGCGATATAC TGAAGATAAA GAAGTCTTAG
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Protein sequence | MNPVGRLALW IMMYIVVMAV VQYAFQFVTS NIYKDAMSYK VYVDILLTLF FGWQIVKAFA DIVALPVAKK QGETAGKAVA NLIKLLGIGA LVASLAGAVS GGAAAAALGG FIGLVIGFAT QQVLSQAVAG IFLLLARPFK IGDKIVGAGQ EGIVEDIGAM YTVVKDAEGN KILIPNNKLI GDILKIKKS
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