Gene Pisl_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0482 
Symbol 
ID4617369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp452529 
End bp453098 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID639783567 
Producthypothetical protein 
Protein accessionYP_930003 
Protein GI119871996 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.215693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGG TAGGAAGACT TGCGTTGTGG ATAATGATGT ACATTGTTGT AATGGCTGTT 
GTACAATACG CTTTCCAATT TGTAACTAGT AACATATATA AAGATGCGAT GAGCTACAAG
GTCTACGTCG ATATTCTACT CACTCTATTC TTTGGGTGGC AGATTGTAAA AGCGTTTGCA
GATATTGTGG CGTTGCCTGT TGCTAAAAAA CAGGGAGAGA CCGCCGGAAA GGCTGTGGCA
AATCTAATAA AACTTTTGGG CATAGGCGCT CTGGTAGCAT CTCTAGCAGG CGCCGTCTCT
GGCGGCGCCG CTGCGGCGGC TTTAGGCGGT TTTATCGGAT TGGTAATAGG CTTTGCAACT
CAGCAAGTGC TTAGCCAAGC GGTAGCCGGC ATCTTTCTAC TTCTCGCAAG GCCGTTTAAA
ATTGGCGACA AAATTGTAGG CGCCGGCCAA GAAGGCATAG TCGAAGACAT AGGCGCTATG
TACACTGTTG TTAAAGATGC CGAGGGTAAC AAGATCTTAA TACCTAACAA CAAACTAATA
GGCGATATAC TGAAGATAAA GAAGTCTTAG
 
Protein sequence
MNPVGRLALW IMMYIVVMAV VQYAFQFVTS NIYKDAMSYK VYVDILLTLF FGWQIVKAFA 
DIVALPVAKK QGETAGKAVA NLIKLLGIGA LVASLAGAVS GGAAAAALGG FIGLVIGFAT
QQVLSQAVAG IFLLLARPFK IGDKIVGAGQ EGIVEDIGAM YTVVKDAEGN KILIPNNKLI
GDILKIKKS