Gene Pisl_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0475 
Symbol 
ID4616293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp446355 
End bp447794 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content44% 
IMG OID639783560 
ProductABC transporter related 
Protein accessionYP_929996 
Protein GI119871989 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000128955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT TTCTCAGGGA AATACACAAG ATTTTTTCAG ATGGTACATA CGCCCTTAGG 
GGTGTCTCTC TTGAAATTTT TCCAGGCGAG ATTTTGGCAT TGTTAGGCGA AAATGGGGCT
GGGAAAACAA CTCTAATGAA GATATTGGCG GGAGTTTACA GACCTACCTC TGGCGAGATA
TATGTAAACG ACAAGAGGGT GAGGTTTAGA AGTGCGAGAG ACGCATTAAA GCTTGGAATT
GCTATGGTTC ACCAACACCC CTCTCTTATA CCTGGACTTA CAGCTTTGGA AAATCTGGCT
ATTTTAGAGG GAGCAAGTTT AAAACCTATA TCAACGGTGT TAAAAGAAAG AGCTGTTAAG
ATATCGGAAG AGCTTGGATT TGAAATTGAG TGGGATAGAG ATGTGGAGGA GTTGCCCCTT
GGTGTAAGAC AGAGAGTTGA AATAGTAAAG GCTCTCTACT GGGGCGCGGA TTTGCTTATA
TTAGACGAGC CTACCACAGT GCTCTCGCCT CCAGAGGTGA GATCTCTTTT CCAAGTAATA
AAAAAATTGA GGAGCCTTGG CAAATCGATA GTCTATATCA CTCATAAAAT ACCTGAGGTA
TTGGAAATAG CTGATCGCGT CGTAGTATTG AGAAGAGGCG TAAAAGTTGC AGAATTTCTT
CCTCCCTATG ACCCCAGGGG ATTAGTTGAA TCTATGGTCG GCGAGTTAAA AATAGAACGT
GTCGAAAGAA TTCAGAAACC GGGGGAAAAC TTCGTGCTTG AAGTAGAAGA TTTATGGATC
TACGAGGGCG GCAGAGCTGT CGTACAAGGC GTGAGTTTTA AAGTGAGAGA GAGGGAGATT
TTGGCCGTTG TTGGTGTAGA AGGCAACGGT CAGGAACATT TAGTTGAAGC TATAGTAGGC
TTAAGGAGGT GGAGAAGGGG TGTGATCAAA ATATACGGCA GACTGGCTTA TATCCCCGAC
GATAGGTTGA GAAAAGCGTT GATACCAGAA TTTACGCTTG TTGAAAATGC GATAATTGGT
AAAGAGAGTG AGTTTGCAAA AAGAGGGATA ATTTCATGGA CTTTGGCGAA ACAATTTGCG
ACAAAGCTAA TTAAAGAATT TGGCATAGTA GCTCCTGGCC CCAGGGCTTT TGTACGTCAC
CTATCGGGTG GGAATCAACA AAAACTTGTA GTTGGGCGTG AGCTAAGTAG GGGGGCTAAG
CTAATAATAG CGCATCAACC TACACGCGGC TTAGACGTAG CTACGACAGA GTATGTCCAT
CAGTTGCTTA TGAAGGCGAG GAATAACGGA GCAGGCATTT TACTTGTGAC AAGCGACTTA
GATGAGGCAT ACAAATTGGC GGACACCATC GCGGTTATCT ACAGAGGCAA AATAGTGGCT
TTAGGCCCTG TAGAAGAGAT GAGGGTAGAC CTAGTGGGTA AGAAGATGGC AGGGTTATGA
 
Protein sequence
MKVFLREIHK IFSDGTYALR GVSLEIFPGE ILALLGENGA GKTTLMKILA GVYRPTSGEI 
YVNDKRVRFR SARDALKLGI AMVHQHPSLI PGLTALENLA ILEGASLKPI STVLKERAVK
ISEELGFEIE WDRDVEELPL GVRQRVEIVK ALYWGADLLI LDEPTTVLSP PEVRSLFQVI
KKLRSLGKSI VYITHKIPEV LEIADRVVVL RRGVKVAEFL PPYDPRGLVE SMVGELKIER
VERIQKPGEN FVLEVEDLWI YEGGRAVVQG VSFKVREREI LAVVGVEGNG QEHLVEAIVG
LRRWRRGVIK IYGRLAYIPD DRLRKALIPE FTLVENAIIG KESEFAKRGI ISWTLAKQFA
TKLIKEFGIV APGPRAFVRH LSGGNQQKLV VGRELSRGAK LIIAHQPTRG LDVATTEYVH
QLLMKARNNG AGILLVTSDL DEAYKLADTI AVIYRGKIVA LGPVEEMRVD LVGKKMAGL