Gene Pisl_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0472 
Symbol 
ID4616318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp444084 
End bp444431 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content41% 
IMG OID639783557 
Productheat shock protein Hsp20 
Protein accessionYP_929993 
Protein GI119871986 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00129647 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATT TCAAAAGAGC TATAGAAGAG GTGACAAAGT CGTTTCAAAA AATGATTGAG 
GAAATTAAAG AAAAGAGAGA CTATCATCTC GTTGAAGAAG GCGACGGGAT TAGGATAGAG
ATAGATATGC CGGGGCTTGA GGCTAGCGAT ATATCTCTTT CGGTAACAAA AGACGGCTCG
TTAATTAAGG CCGAGGGCGC TAGAGGAGAT AGAAAATATT CAAAACTTAT ACGTCTGCCA
GTTAGGATAG ACCCCTCTAC AGCATCTGCT TTGTATAAAA ACGGCGTGCT TATAATTACG
GCTAAGAAAA TCAGAGAAGA GGAAATAAAA ATCCCAGTCC GTGGCTAG
 
Protein sequence
MEDFKRAIEE VTKSFQKMIE EIKEKRDYHL VEEGDGIRIE IDMPGLEASD ISLSVTKDGS 
LIKAEGARGD RKYSKLIRLP VRIDPSTASA LYKNGVLIIT AKKIREEEIK IPVRG