Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0466 |
Symbol | rplP0 |
ID | 4616492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 440417 |
End bp | 441448 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783551 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_929987 |
Protein GI | 119871980 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.606167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCA TAGGCAAGAG GAGATATGTA AGAACTAAGC CATATCCACG GCGTAAGGTT AAAATAGTAG AAGAGGCCAT AGATTTATTA AAACGCTATC AATATATCTT TCTATTTGAC CTACACGGGC TTTCTGCCAG AATTCTACAC GAATACAGAT ATAGGTTAAG ACCATATGGT CAGATTAAGA TTATAAAGCC TACGTTATTT AAAATCGCGT TTACTAAAGC CTACGGAGGT GTGCCAATAG ATATCGCAGA AAAAGTCCGG GGCGAAATAG GCTTCTTTTT CACAAATGCC AACCCTGCAG AGGTTATTAA AATAATCGCT GAAAATAGCG TTAGAAGAGC CGCCAAGCCT GGAGACAAAG CGCCTTTTGA TATAGTCGTC CCAGCAGGTC CTACAAACGC ATCGCCAGGC CCTATAATTT CTAAATTCGG CAAATTGAAA ATCCCCACTA GAGTTCAAGA AGGTAAGATC TGGATTGTAA AAGATACTGT AGTTGCCAAA GCCGGTCAAG AGATTACGCC AGAAATAGCT GAGGTTCTCA GAGTAGTTGG GATAGAGCCT ATATTTGAAC AACTAAGGCT TATAGGCGTT ATTTGGAAGG GCAAGAGATT TGTAGAAATA GCCGAGCTTG CCGTAGACGT CGGTAAGTAC AAAGAGCTAT TTGAAGCCGC AGCTGTTTAT GCAAAGAATT TAGCGCTTAA CATAGTCTAC CCAACTAGAG AGGTATTGCA AATAGTTATA CCGGCGGCTC ATATGAGGGC AGTTGCTCTT GCAGCTAGAC TCGGCGTAGT GACTAGAGAG ACGTTACCAA TGTTATTAAG CAGAGCAATT GCAGAGGCTA ACTCCTTGGC GGCTTTAGTT GCATCTAAGG CACCGGAACT CGGTCTATCT GTGTCAACAG TGCCACAACC TACGTCACAA CAACCGATAC AACCTACTGA AACTCCAAAA GAGAGCGCCG AGGAGAAAAA GGAGGGACCT AGCGAGGAGG AAATCGCGGG ATCTTTGGCG TCTCTCTTTT AA
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Protein sequence | MLAIGKRRYV RTKPYPRRKV KIVEEAIDLL KRYQYIFLFD LHGLSARILH EYRYRLRPYG QIKIIKPTLF KIAFTKAYGG VPIDIAEKVR GEIGFFFTNA NPAEVIKIIA ENSVRRAAKP GDKAPFDIVV PAGPTNASPG PIISKFGKLK IPTRVQEGKI WIVKDTVVAK AGQEITPEIA EVLRVVGIEP IFEQLRLIGV IWKGKRFVEI AELAVDVGKY KELFEAAAVY AKNLALNIVY PTREVLQIVI PAAHMRAVAL AARLGVVTRE TLPMLLSRAI AEANSLAALV ASKAPELGLS VSTVPQPTSQ QPIQPTETPK ESAEEKKEGP SEEEIAGSLA SLF
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