| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0446 |
|---|
| Symbol | |
|---|
| ID | 4618188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 426566 |
|---|
| End bp | 427282 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639783529 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_929967 |
|---|
| Protein GI | 119871960 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2236] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0365147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATATAA ACTGGGTAGG AACTTACCTC AACGTGCCTA AGATCCCTGT AAAAGTTGTG
ACATTTGACG AAATTGTTGA GTGGAGTAGG AAATTAGCAG AGAAAATCAA AGAGAGTAAC
TGGCAACCAG ACGTAATAGT AGCTGTGGCC CGCGGCGGTT ATGTACCAGC GCGCCTTCTC
TGTGATTGGC TTGGCGTGAG CGACCTCCTC AGTGTACAAG TGGTACATTG GCCTTCTGCT
GCACAAATCG CTGAGAAAGC TTATGTGAAA TATCCAATTA ACGTAGATCT AAGTGGTAAA
AGAGTGTTGG TAGTAGACGA TATTGTCGAC ACTGGCGATA GTATCGAGCT TGCAAAAAAG
AGTCTCGAAG AGTGTTGTAG ACCAAAAGAG GTTAAGACAG CCGCGTTACA GGTAATAACA
AGCGTTGCCA AATTTATGCC GGATTTCTAC GCAGTAGAGG TTAGAGAGTG GATTTGGTTT
GCCTATCAAT GGAATGCCGT AGAAGATGCC ACAGGCTTTA TTATGAAGAT CGTAAAAGAG
ACTGGAAAAA CCGAGTGGTG TCTTGACGAA CTAATACAAG CGCATCTAGA GTGGTACGGT
AGTGAATATG TAGAGAAGAG ATTTGGCTAT ATGCTGTACG CTTTGGATAT GCTTGTTAAA
AGAGGCTATA TTAAGCTTAG CAAATGTCTA GCCTCTCCTA ATATCGCGGT ACGTTAA
|
|---|
| Protein sequence | MYINWVGTYL NVPKIPVKVV TFDEIVEWSR KLAEKIKESN WQPDVIVAVA RGGYVPARLL
CDWLGVSDLL SVQVVHWPSA AQIAEKAYVK YPINVDLSGK RVLVVDDIVD TGDSIELAKK
SLEECCRPKE VKTAALQVIT SVAKFMPDFY AVEVREWIWF AYQWNAVEDA TGFIMKIVKE
TGKTEWCLDE LIQAHLEWYG SEYVEKRFGY MLYALDMLVK RGYIKLSKCL ASPNIAVR
|
|---|
| |