Gene Pisl_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0440 
Symbol 
ID4618130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp423259 
End bp423735 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content45% 
IMG OID639783523 
Product30S ribosomal protein S19e 
Protein accessionYP_929961 
Protein GI119871954 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCAG TTAAAGAAGT TCCTGCCGAT ATGTTAATAG CTGAATTAGC TAAATATATA 
AAAGAGAATA TACCGCAGGT AAAGCCGCCG GTATGGGCGC CTTTTGTAAA AACTGGGGCT
AACAAAGAGA GGCCTCCTAT GAACGAAGAC TGGTGGTATA TAAGAGCAGC ATCTATAATG
AGAAAACTAT ACCTATATGG GCCTGTTGGC GTCGGTAGCT TAAGGACGGC CTATGGCTAC
AGGGCTAAGA TAGGCGATAA GACAAGACCT GAAAGAACTA GAAAAGCGGG GGGCGCCATA
ATTAGAAAGA TATTACAACA GCTTGAACAA GCTGGTCTAG TCGCTAAGAC CAAACAGGGG
AGAATATTGA CTCCAGAGGG CAAGTCGCTT GTCGACAGGA TAGCTGCAAA AATTGGAAGA
GAGCTTACAA AGACAAGACC GGAGCTTTTG AAATACATCG CGCCGCCTAA GGAGTAA
 
Protein sequence
MTSVKEVPAD MLIAELAKYI KENIPQVKPP VWAPFVKTGA NKERPPMNED WWYIRAASIM 
RKLYLYGPVG VGSLRTAYGY RAKIGDKTRP ERTRKAGGAI IRKILQQLEQ AGLVAKTKQG
RILTPEGKSL VDRIAAKIGR ELTKTRPELL KYIAPPKE