Gene Pisl_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0439 
Symbol 
ID4617585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp422853 
End bp423185 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content41% 
IMG OID639783522 
Producttranscription termination factor Tfs 
Protein accessionYP_929960 
Protein GI119871953 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT GTCCTAACGA CAAGAGTTTG TTAATCCCTG TAAGAAAGGG GGATAAGACC 
GTATTGAGAT GTCCAAAATG TGGATATGAA GAGGAGATTA GCGGCGATGC GAAAAACAGA
TATCAGAGCA AGTCTATTGT AGAGAGTAAA AACACTATCA TAGTGGTGTC TGATAATATA
ATAAATCTGC CTAAGGTTAA GACTAGGGGA TGTCCCAAAT GTGGACACGA CGAGGCTTAT
GTATGGGTTC AACAAACTAG AGCGGCAGAT GAGCCGCCAA CGCGTTTCTA CAGATGTACA
AAATGTGGAT ATACATGGCG CGAATACGAA TAA
 
Protein sequence
MRFCPNDKSL LIPVRKGDKT VLRCPKCGYE EEISGDAKNR YQSKSIVESK NTIIVVSDNI 
INLPKVKTRG CPKCGHDEAY VWVQQTRAAD EPPTRFYRCT KCGYTWREYE