Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0439 |
Symbol | |
ID | 4617585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 422853 |
End bp | 423185 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639783522 |
Product | transcription termination factor Tfs |
Protein accession | YP_929960 |
Protein GI | 119871953 |
COG category | [K] Transcription |
COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
TIGRFAM ID | [TIGR01384] transcription factor S, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTTT GTCCTAACGA CAAGAGTTTG TTAATCCCTG TAAGAAAGGG GGATAAGACC GTATTGAGAT GTCCAAAATG TGGATATGAA GAGGAGATTA GCGGCGATGC GAAAAACAGA TATCAGAGCA AGTCTATTGT AGAGAGTAAA AACACTATCA TAGTGGTGTC TGATAATATA ATAAATCTGC CTAAGGTTAA GACTAGGGGA TGTCCCAAAT GTGGACACGA CGAGGCTTAT GTATGGGTTC AACAAACTAG AGCGGCAGAT GAGCCGCCAA CGCGTTTCTA CAGATGTACA AAATGTGGAT ATACATGGCG CGAATACGAA TAA
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Protein sequence | MRFCPNDKSL LIPVRKGDKT VLRCPKCGYE EEISGDAKNR YQSKSIVESK NTIIVVSDNI INLPKVKTRG CPKCGHDEAY VWVQQTRAAD EPPTRFYRCT KCGYTWREYE
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