Gene Pisl_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0428 
Symbol 
ID4618037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp412459 
End bp414270 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content49% 
IMG OID639783511 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_929949 
Protein GI119871942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGTA TTTTTGGTAT AGTATTTGCC GAGAGGCCTA GGAGAAACTT AGGCGAAATA 
TTGAGAAGAG CTTTAGAAAG GCTTGAATAC AGGGGATACG ACTCAGCCGG CATCGCCGTA
GTAGACAGAG GGCTGTTAAT AGTTAGGAAA GACGCGGGAA AAGTCGCAGA GGTGGCCGCG
CGGTACAACT TTGACTCTAT ACAAGGCACA GCCGGTGTGG CGCATACCCG CTGGGCTACC
CATGGAAAGC CTGACCAATC TAACGCCCAC CCCCATATAG ACTGCGGCGG CATAATTGCT
GTAGTTCACA ACGGCATTAT AGAAAACTAC GCCGAATTAA AGGAGGAGCT CTTGGCCAAG
GGGCACGTAT TCCGTTCTGA AACGGACACC GAGGTTATTG CACACCTCGT CGAGGAGTAT
AAGAGACAAG GCGTAGACAC CTTTACAGCC TTTAAAAAAG CTATTTCAAA AATAAGGGGG
GCCTACGCCG TGGCTTTGAT AGATGCGGAA AATCCAAAGG TAATATACTT CGCCAGAAAT
CTATCTCCCC TTATAATTGG CGTCGGCGAC GGCTTTAATA TAATTGCCAG CGATATACCA
ACAGTCCTCG ACTACACGAG AAGAGTCATA GCGGTAAGAG ATGGGGAGTA CGGCTACATA
ACCCCCACCC AGGTGTATAT TGAAGCAGAC GGAGTGTCAC AAGACGTATC CAGCCGCATA
GAGGAGATCC CCTGGAGTGC AGAAATGGCT ACAAAAGGCG GCTATCCACA CTTTATGTTA
AAAGAGATAT ATGAACAGCC CGAGTCTTTG GCCACGACTG TCGCAGGGCT TGAGTGGCCT
TTGTTAGAAA CTGCCGCAAA CACTTTGCTC TCTGCCAGAA ATGTCTACAT AGTCGGCGCC
GGCTCGTCAC TTCACGCCGG CCTCGCCTTC CTACAATTGC TACTACGTAT AAAAGTGACT
CCAGTTCCAA TAGTAGCTTC TGAATACGCC ACATATGAAC AGCTTTTTGA CAAAGGCGAT
GTGGCAGTCG CAATTTCACA ATCAGGCGAA ACTATAGACA CAATAAAAGC GGTGAGAACG
ATGAGGGAAA AAGGCGTCAG AGTTCTAGCT GTGACAAACG TCGTCGGTAG TACAATATCT
AGAGAAAGCG ACGCGGTTAT CTACACACGT GCCGGCCCAG AGATAGGCGT AGCCGCCACA
AAGACCTTTA CCACACAAGT AGCCACCCTC TCGGCGCTTT ATGTAGCAGC GTTAAAAACA
CTAGGCTACG ATACAGCCCC CATGGAGCGG GAGATAAAGG CGCTGCCCGA CCTTGTGAGA
AAAACACTAG AAAATACAGC AGGCGCGGCA AAAGACCTAG CAAAGAGACT TAAGAATAAG
CCAAGCGCTT ATTATCTAGG CAGAGGCGCG GCGTTGCCAG TGGCTATGGA GGGCGCTCTA
AAATTAAAAG AAGTGGCGTA TATACATGCC GAGGCCTACC CAGCGGGGGA ATCAAAACAC
GGCCCCATCG CGTTAGTAGA AGAGGGCTTC CCCGTCCTCT TTGTGTTTTC AGACCCAAAC
ACAAGAGAAA AGACGTTAAG CAACGTGGCG GAAATGAAAG CCAGAGGCGC TTACACAATA
GGCACAGTGC CTATGAAAAG CGACATTGCC AAAAGACTAG ACTACGCCAT AGAGGTGCCA
GAATTGGGAG AACTCACCGC GCCTATATTA CATATAGTGC CTCTCCAACT ACTGGCATAT
TTCACCGCCG TGGAAAAAGG CTACGACCCA GACAAGCCTA GAAACCTTGC AAAAACCGTC
ACCGTGGAGT AG
 
Protein sequence
MCGIFGIVFA ERPRRNLGEI LRRALERLEY RGYDSAGIAV VDRGLLIVRK DAGKVAEVAA 
RYNFDSIQGT AGVAHTRWAT HGKPDQSNAH PHIDCGGIIA VVHNGIIENY AELKEELLAK
GHVFRSETDT EVIAHLVEEY KRQGVDTFTA FKKAISKIRG AYAVALIDAE NPKVIYFARN
LSPLIIGVGD GFNIIASDIP TVLDYTRRVI AVRDGEYGYI TPTQVYIEAD GVSQDVSSRI
EEIPWSAEMA TKGGYPHFML KEIYEQPESL ATTVAGLEWP LLETAANTLL SARNVYIVGA
GSSLHAGLAF LQLLLRIKVT PVPIVASEYA TYEQLFDKGD VAVAISQSGE TIDTIKAVRT
MREKGVRVLA VTNVVGSTIS RESDAVIYTR AGPEIGVAAT KTFTTQVATL SALYVAALKT
LGYDTAPMER EIKALPDLVR KTLENTAGAA KDLAKRLKNK PSAYYLGRGA ALPVAMEGAL
KLKEVAYIHA EAYPAGESKH GPIALVEEGF PVLFVFSDPN TREKTLSNVA EMKARGAYTI
GTVPMKSDIA KRLDYAIEVP ELGELTAPIL HIVPLQLLAY FTAVEKGYDP DKPRNLAKTV
TVE