Gene Pisl_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0426 
Symbol 
ID4618308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp410714 
End bp411202 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID639783508 
Producthypothetical protein 
Protein accessionYP_929947 
Protein GI119871940 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.088537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGTC CGATTTGCGT CAGGCCTATA GGAGTTGTTG AAGTGGGTCT GCCTAGGTGG 
GGCAGTGTGG ATAGGTTCGA CTTTGTGTCT GTGATTAGGG TGTTCGACGA GTATGTGGAT
GGCCTTGTGG GGCTTGAGGA GTACAGCCAC GCCTTTATCC TCTGGCATTT CCACGAGGCA
GGGGCGCCGC GTCTTAGGCT GAGGCCGTGG GGGAGGGAGG ATCTTCCCGA GGTGGGGATA
TTTGCCACGC GGTTTCCGCA GCGCCCCAAC GCGCTGGCGC TTACGATTGT GAAGATAGTG
GAGGTGGATC CGCCTAGGGT CAGAGTGCTT GGGCTAGATG CTTGGAGTGG CAGCCCGGTG
TTAGATATCA AGCCTTATGA CCACCTCGAT GTGGTTAACG AGTTCCGTAC GCCGGATTGG
GTCGAGGAGT TTTTCAGGGG GTCTGCCGAT AAGTTCCCCC GCTGGCTGGG GCCTGCTAGG
AAGACGTAG
 
Protein sequence
MSCPICVRPI GVVEVGLPRW GSVDRFDFVS VIRVFDEYVD GLVGLEEYSH AFILWHFHEA 
GAPRLRLRPW GREDLPEVGI FATRFPQRPN ALALTIVKIV EVDPPRVRVL GLDAWSGSPV
LDIKPYDHLD VVNEFRTPDW VEEFFRGSAD KFPRWLGPAR KT