| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0405 |
|---|
| Symbol | |
|---|
| ID | 4617215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 391216 |
|---|
| End bp | 392079 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639783485 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_929926 |
|---|
| Protein GI | 119871919 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | [TIGR02651] ribonuclease Z |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.945649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.820015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTCT TAAAACTCGT ATTTCTAGGC ACAGGCGGCG CAGTGCCTAA ATCAGATAGA
ATGTTGCCAA CTATATACCT AGAGGATTGG CTAGGCCATA GAGTTTTACT CGACGCAGGA
GAGGGGGCTC AATATAGACT GTTGCAAATA GACGTCTCCC CCGCCTCTCT CACCCTAGTC
GCAATTACAC ATCAACACGA AGACCACACA TTAGGCCTAC CCGGTTTAGT AATCACTAAC
AAGTTTCTGG GCGGAAAATT GAAAGTACTA GCTCCGAGAT CTATGCATAA GATCTTAGAG
AGACTTGGCG TTGAGGTAAG CGACAGCTAC GAAGAGGGGC GCTTCAAAAT AACATGCGTA
GAGGTGTGCC ACACTGTAGA CGCGTGTGGG TGGCTCTTTC AATGGGACGT CGGCTATAAG
CTAGATCTTT CTAAAGTCGC CGGATTGCCC AAGTGGGCGC TTACGAATTT AATAAGAGGA
GAGGCTGTGA AAGTAGGCGG TAGGTTAATA ACCCCAGAAG AGGTGGCAGA TCTTACACAT
AAGAGATTCC GCCGGCTGTT ATACACTGGA GATACTGCGC CGTGCCCCCA GATGTGGAAA
ACCGTCGGCG AGGTAGACGT GTTAATACAC GAGGCCACTT TTGCCGACGA CGTAGAACCT
CAAAAAGCAC ATGACGAGGG CCATTCAACA GTGGCAGACG CCGTTGAGGC CGCAAAGACG
CTTAAAGCTG ACGTACTTAT ACTTACACAT ATAAGCGCTA GATACCCCAG TAAAGAGAGA
CATAAAGCTC TAGCCGACGC CGTTAAGCCG CCGCCTCATA TCTATATCCC CGACGACTTT
GACACATTGC TTATCAAACT TTAA
|
|---|
| Protein sequence | MPLLKLVFLG TGGAVPKSDR MLPTIYLEDW LGHRVLLDAG EGAQYRLLQI DVSPASLTLV
AITHQHEDHT LGLPGLVITN KFLGGKLKVL APRSMHKILE RLGVEVSDSY EEGRFKITCV
EVCHTVDACG WLFQWDVGYK LDLSKVAGLP KWALTNLIRG EAVKVGGRLI TPEEVADLTH
KRFRRLLYTG DTAPCPQMWK TVGEVDVLIH EATFADDVEP QKAHDEGHST VADAVEAAKT
LKADVLILTH ISARYPSKER HKALADAVKP PPHIYIPDDF DTLLIKL
|
|---|
| |