| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0402 |
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| Symbol | |
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| ID | 4617829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 387381 |
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| End bp | 388643 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639783482 |
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| Product | Pre-mRNA processing ribonucleoprotein, binding region |
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| Protein accession | YP_929923 |
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| Protein GI | 119871916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.143885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAA TATACATAGC GACAGATGTA CTGGGGTTTT TCGCGCTTGA CGAGACGGGA
AATCTCGTAG ATAAGGTGTT TTATGAGAGA AAACCCGACC TAGTAGCTGA GAGATTGATA
GAACTTGAAA AGTCAAATTA CGTACCAGAA CTCCTTACAA TAATCGAGAG GGTGAAGACA
AAGGCGCAGA AAATCGTGGT AGAGGATCCT GAGCTTGCGA GGAAGCTTGT GTCTGTTATC
AAGGGCGTAG AGATCGTGGC CGAGAGCCCC TCCCCCGTGC TCACGACATT TAGACAAAAC
TTTTCTAAGT ACCTCCAGGC GTTGGGCTTA AGCTGGGAAG ATTATAGAAA CTACCTATTT
GAAATAAGCG ATTTGGTAAC CAGGCGTAAG CTAAGACAAG CTGTTGAAAA GAGAGACCTA
TTTATTGCCC AAGCTATTAG TACACTTGAT GATGTAGATA AAATACTGAA TCTAATAGCG
TCAAGAATTA GAGAGTGGTA CGGCTTGCAC TTTCCTGAGT TGGAGGAGTT GGTGAGAGAC
AATAAGGAGT ATGTAAGGAT AGTGTACTAT ATAGGACATA GATCTGGGAT AAGCGAGGAG
AGTATAAGGA AGGTATTTCC GGATATGCCT GCGGAGAGAG TGAAGAAAAT AGTCGAGTCT
GCAAAGAAAA GCATAGGCGC TGAGATGTCA GAGTGGGATT TAGCTCAGTT AAAATCGTAC
GCAGAGGCGT TTATCAAACT GGAGTCATAT AGAGAAAGCT TGGCTACATA TATTGACGAG
GCAATGAAAG AGGTTGCGCC TAACATAAGG GAGTTAGTCG GGCCGTTGTT AGGCGCCAGA
TTGATAAAAC TTGCCGGTGG GCTGACGAGG ATGGCGTTTC TTCCCGCATC TACAATACAG
GTTCTCGGCG CTGAGAAGGC TTTATTTAGA GCTTTACGTA CTGGAGGGAA GCCTCCTAAA
CACGGCGTAA TATTCCAATA TCCCGAGATC TTTAGATCGC CGAGGTGGCA GAGAGGTAAG
ATAGCGAGAG CTCTTGCGGC TAAGTTGGCG ATTGCGGCTA AAGCCGACGC TTTTACTGGT
AATTTCATCG CCCCCAGACT AAAGGAGGAA CTAATGAAAA GAATACAAGA GATCAAGACT
CTCTACGCAA AGCCGCCTCC CAAGACCCCT CAGCAACCGG CTACAAAGAC CCCGCCTCCA
CCGCCGCCTC CTCCAAGCGG AGGGGGGAAG AGACCGCCTC CGCCTAGGAG AGGACGGCGC
TGA
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| Protein sequence | MTKIYIATDV LGFFALDETG NLVDKVFYER KPDLVAERLI ELEKSNYVPE LLTIIERVKT
KAQKIVVEDP ELARKLVSVI KGVEIVAESP SPVLTTFRQN FSKYLQALGL SWEDYRNYLF
EISDLVTRRK LRQAVEKRDL FIAQAISTLD DVDKILNLIA SRIREWYGLH FPELEELVRD
NKEYVRIVYY IGHRSGISEE SIRKVFPDMP AERVKKIVES AKKSIGAEMS EWDLAQLKSY
AEAFIKLESY RESLATYIDE AMKEVAPNIR ELVGPLLGAR LIKLAGGLTR MAFLPASTIQ
VLGAEKALFR ALRTGGKPPK HGVIFQYPEI FRSPRWQRGK IARALAAKLA IAAKADAFTG
NFIAPRLKEE LMKRIQEIKT LYAKPPPKTP QQPATKTPPP PPPPPSGGGK RPPPPRRGRR
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