Gene Pisl_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0399 
Symbol 
ID4616618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp384964 
End bp385518 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID639783479 
Productcytidylate kinase 
Protein accessionYP_929920 
Protein GI119871913 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase
[TIGR02173] cytidylate kinase, putative 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.222549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTTA TAGCTATCTC TGGACAGCCA GGTAGCGGAA AGACTACAGT AGCTAGAGAG 
GTAGCTAGGG TGTTAAATTT ACCACTTGTC TCATCCGGGT CACTTTTCAG AGAGTTGGCG
GCCAAAATGG GCATAGATTT CATAGAGTTT CATAAATATG CCGAGAAAAA CCCCGATATT
GACAAGGTAG TAGACTCCAT GGCTATAGAA AGAGCGAAAG CCGGTAACGT AGTTCTCGAA
GGCCATCTAG CGGCGTGGAT TGTGCGACCT TATGCGGACA TATGTATATA CTTAAAGGCA
TCTAGCGAAA TACGTGCAAG ACGAATTTCT ATACGTGACA AAAAAAGCTT CGAAGATGCT
CTACGGGAGG TAAGAGAGCG TGAGGAACTT AATAGGAGGC GATATCTTTC TCTCTACAAT
ATAGACATCA ACGACCTCTC GGTGTTCGAT CTTGTCTTAG ACACTTCATA TCTCTCTATA
AACGATGCCA TTAGAATTAG CTTAGACTAC ATTTGCACAG TGTTGGGATT TAAGTACTCC
AGAAAATTCT GTTGA
 
Protein sequence
MVVIAISGQP GSGKTTVARE VARVLNLPLV SSGSLFRELA AKMGIDFIEF HKYAEKNPDI 
DKVVDSMAIE RAKAGNVVLE GHLAAWIVRP YADICIYLKA SSEIRARRIS IRDKKSFEDA
LREVREREEL NRRRYLSLYN IDINDLSVFD LVLDTSYLSI NDAIRISLDY ICTVLGFKYS
RKFC