| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0397 |
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| Symbol | |
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| ID | 4616364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 383289 |
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| End bp | 384623 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639783477 |
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| Product | elongation factor 1-alpha |
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| Protein accession | YP_929918 |
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| Protein GI | 119871911 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00483] translation elongation factor EF-1 alpha
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.209425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0958678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGA TAATATTACC ACCAAAACCA ACAGCTCTAC AAAAGCCGCA CTTAAACCTA
GCAGTTATTG GCCACGTTGA CAATGGCAAA TCGACATTGG TAGGCCGTCT ACTATATGAG
ACAGGTTATG TAGATGAAAA AGCGTTTAAG GAAATTGAAG AGATGGCTAA AAAGATGGGG
AAGGAAGACT TCGCTTTTGC ATGGATTCTT GATAGATTTA AGGAAGAGCG TGAACGCGGC
GTAACTATCG AGGCTACACA CGTGGGTTTT GAGACTAATA AATTATTCAT TACAATCATC
GACTTACCTG GCCATAGAGA CTTCATAAAG AACATGATTG TTGGAGCTAG CCAAGCAGAT
GCAGCTCTCT TTGTAATTTC TGCACGTCCT GGAGAGTTTG AAACAGCCAT AGGGCCTCAG
GGACAGGGCA GAGAACATCT ATTTCTCATT AGGACATTGG GTGTTCAACA AATAGTAGTT
GCTGTTAATA AGATGGATAT TGTAAACTAC GACCAGAAGA GGTATGAACA GATTAAAGCC
GAAGTCTCTA AGTTATTAAA ACTATTGGGC TACGACCCAA GCAAAATACA CTTTATCCCA
GTAAGTGCGA TAAAGGGAGA TAACGTCAAA ACTAAGTCTT CCAACACGCC GTGGTATAAC
GGGCCCACGC TACTTGAAGC TCTTGATACC TTCCAACCGC CTCCAAGACC TGTTGACAAA
CCGCTTAGAA TGCCGATACA AGACGTATTT ACAATTACAG GCGCGGGCAC TGTGGTAGTT
GGTAGAGTTG AGACCGGCGT GTTAAAGGTT GGCGATAGAG TTGTCATAGT ACCTCCTGCT
AAGGTAGGCG ACGTGAGATC TATAGAGACT CACCACATGA AACTTGAGCA AGCGCAACCA
GGCGATAATA TAGGTGTTAA CGTGAGAGGT ATAAGCAAAG AGGATGTAAG ACGTGGAGAT
GTATTAGGTA AAGTAGACAA CGTCCCGACT GTCGCTGAAG AGATAGTAGC CCGTGTAGTT
ATACTATGGC ATCCCACAGC TATAGGCCCA GGCTACGCGC CAGTTATGCA TATACATACA
GCCACGGTAC CTGTCCAAAT TGTAGAGCTT GTATCTAAAC TCGACCCACG CACTGGTCAA
GCAGTTGAAC AAAAGCCTCA ATTTATAAAG CAGGGCGATG TGGCAATTGT AAAGATTAAG
CCTCTGAAGC CTGTAGTTGC GGAGAAGTTC AGTGAATTCC CAGCGCTTGG CCGCTTTGCT
CTCCGCGACA TGGGCAGAAC TATTGCGGCT GGCCAGATAA TTGAGGTAAA GCCTGCGCAA
GTGCAGATTA AGTAA
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| Protein sequence | MPSIILPPKP TALQKPHLNL AVIGHVDNGK STLVGRLLYE TGYVDEKAFK EIEEMAKKMG
KEDFAFAWIL DRFKEERERG VTIEATHVGF ETNKLFITII DLPGHRDFIK NMIVGASQAD
AALFVISARP GEFETAIGPQ GQGREHLFLI RTLGVQQIVV AVNKMDIVNY DQKRYEQIKA
EVSKLLKLLG YDPSKIHFIP VSAIKGDNVK TKSSNTPWYN GPTLLEALDT FQPPPRPVDK
PLRMPIQDVF TITGAGTVVV GRVETGVLKV GDRVVIVPPA KVGDVRSIET HHMKLEQAQP
GDNIGVNVRG ISKEDVRRGD VLGKVDNVPT VAEEIVARVV ILWHPTAIGP GYAPVMHIHT
ATVPVQIVEL VSKLDPRTGQ AVEQKPQFIK QGDVAIVKIK PLKPVVAEKF SEFPALGRFA
LRDMGRTIAA GQIIEVKPAQ VQIK
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