Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0377 |
Symbol | |
ID | 4617650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 364719 |
End bp | 365525 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639783457 |
Product | 6-phosphogluconate dehydrogenase, NAD-binding |
Protein accession | YP_929898 |
Protein GI | 119871891 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.312842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.148533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATAA CTATTATTGG CATGGGAAAT ATGGGTAAGG CGTTTGCAAA ACGCGCTGCA TCGCTAGGCT ATAATGTATA TTGGTGGAAT AGAACTAGAG AGAAGGTTAA AGACGCGCCT GGCAAAGCTA TAAACAAGCC AGAGGAGGCA AGAGGATTTG TGGCTATTTT TGTCGCGGAC GATACCGCTC TCTTCAACGT GCTCCCAAAT ATCGGCGGTG ATTACATAGC GCTTTGTGGC ACATATTCTA TCGGTGCTGT TAAAAAAGCG GTGGAGACGC TAGGAGAAAA GAGAGTTTTT GCCATGCCGG TAGTAGGCAG TCCGCGCAAT GTGGAAGGGG GAGACGCTAT ATATATCGTA GGCGCCCCCG ATGAGTTATA TATAAAACTC AGGCCGACGC TTGAGAAATT TGGCACGTTG TTTTACGTTG GAGATAACGT AAAAGCCACT GCTCTTAAAC TAGCCTTTAA TTCTCTACTG ATTTCTACAG TGGCTACATT AGGCGAGTCT CTTTCTCTGG CTGTTAAATA CGGCATTAAA CCCGAGGTGT TTAAAGAACT TTTGTCTATG ACTGTGTTTA AAGAAGTGGC GGCGCGTTAT ATTGATAGAA TGTTAGGCAG CGGACAACCG ACGTTTACTA TTAGAAATGC TGCAAAAGAT ATGCGCTACG CCGCCACTGC CGCAGGCGAG GCTGAGTCCG GGTCAGTAGC CATAAGCGGA GTCAAGGCGC TATACGAACT TTTAACTGCA CTGGGGTACG GAGATGAAGA CTATGTAAAA GCCGGATATC TCGCAGGCAG AAAATGA
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Protein sequence | MDITIIGMGN MGKAFAKRAA SLGYNVYWWN RTREKVKDAP GKAINKPEEA RGFVAIFVAD DTALFNVLPN IGGDYIALCG TYSIGAVKKA VETLGEKRVF AMPVVGSPRN VEGGDAIYIV GAPDELYIKL RPTLEKFGTL FYVGDNVKAT ALKLAFNSLL ISTVATLGES LSLAVKYGIK PEVFKELLSM TVFKEVAARY IDRMLGSGQP TFTIRNAAKD MRYAATAAGE AESGSVAISG VKALYELLTA LGYGDEDYVK AGYLAGRK
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