Gene Pisl_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0377 
Symbol 
ID4617650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp364719 
End bp365525 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID639783457 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_929898 
Protein GI119871891 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.312842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.148533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAA CTATTATTGG CATGGGAAAT ATGGGTAAGG CGTTTGCAAA ACGCGCTGCA 
TCGCTAGGCT ATAATGTATA TTGGTGGAAT AGAACTAGAG AGAAGGTTAA AGACGCGCCT
GGCAAAGCTA TAAACAAGCC AGAGGAGGCA AGAGGATTTG TGGCTATTTT TGTCGCGGAC
GATACCGCTC TCTTCAACGT GCTCCCAAAT ATCGGCGGTG ATTACATAGC GCTTTGTGGC
ACATATTCTA TCGGTGCTGT TAAAAAAGCG GTGGAGACGC TAGGAGAAAA GAGAGTTTTT
GCCATGCCGG TAGTAGGCAG TCCGCGCAAT GTGGAAGGGG GAGACGCTAT ATATATCGTA
GGCGCCCCCG ATGAGTTATA TATAAAACTC AGGCCGACGC TTGAGAAATT TGGCACGTTG
TTTTACGTTG GAGATAACGT AAAAGCCACT GCTCTTAAAC TAGCCTTTAA TTCTCTACTG
ATTTCTACAG TGGCTACATT AGGCGAGTCT CTTTCTCTGG CTGTTAAATA CGGCATTAAA
CCCGAGGTGT TTAAAGAACT TTTGTCTATG ACTGTGTTTA AAGAAGTGGC GGCGCGTTAT
ATTGATAGAA TGTTAGGCAG CGGACAACCG ACGTTTACTA TTAGAAATGC TGCAAAAGAT
ATGCGCTACG CCGCCACTGC CGCAGGCGAG GCTGAGTCCG GGTCAGTAGC CATAAGCGGA
GTCAAGGCGC TATACGAACT TTTAACTGCA CTGGGGTACG GAGATGAAGA CTATGTAAAA
GCCGGATATC TCGCAGGCAG AAAATGA
 
Protein sequence
MDITIIGMGN MGKAFAKRAA SLGYNVYWWN RTREKVKDAP GKAINKPEEA RGFVAIFVAD 
DTALFNVLPN IGGDYIALCG TYSIGAVKKA VETLGEKRVF AMPVVGSPRN VEGGDAIYIV
GAPDELYIKL RPTLEKFGTL FYVGDNVKAT ALKLAFNSLL ISTVATLGES LSLAVKYGIK
PEVFKELLSM TVFKEVAARY IDRMLGSGQP TFTIRNAAKD MRYAATAAGE AESGSVAISG
VKALYELLTA LGYGDEDYVK AGYLAGRK