Gene Pisl_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0370 
Symbol 
ID4617949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp358856 
End bp359539 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID639783450 
Productnucleotidyl transferase 
Protein accessionYP_929891 
Protein GI119871884 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.357076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTG TGATTTTAGC CGGTGGGTTT GGAAAACGGC TTGCGCCACT GACAAACGAA 
TTACCTAAGC CGCTGTTGCC AGTTGGCGGA AAGCCTATTC TTGTGAGACA GATCGAATGG
CTTAGGAGAT ATGGAATTGT CGATATTATA CTGGCCGTGG GTTACCTAAG GCATAAGATC
TTTGAGGCTC TGGGAGATGG GCGTAAATAC GGCGTTCGTC TCTTCTACAG TGTTGAGGAG
GAGCCCCTCG GCACTGGGGG CGCTATAAAA AACGCCGCTC CCTATCTAAC AGACGATGTA
TTTATAGTAG TGAACGGCGA CGTGTTGACT AACCTGCCTG TAGATAGAGT TGTTGAAGCT
CTAGAGAACG CAGATGGGGC AATTGCGCTT GTGCCTCTCA GAAGTCCCTA CGGCATTGTT
GAGTTTGACT CTAACGGCTA TATCTCTAGG TTTAGAGAAA AGCCGCTGTT AGAGGGCTTT
TATATTAACG CAGGCGTTTA TGCTCTAAGG AAAAAAGTGC TGTCGGAGTT GCCAGACAGG
GGGAATATAG AGGAGACTCT CTTCCCCTCG CTGGCGCAAC AGAGACGTCT TAAGGCTATT
GTATTTAGAG ATGTCTTTTG GCGTTCTGTA GATAGTCTAA AAGACTTAGA AGAAGTAGAT
AAGTATTTTA CTAATGAATC TTGA
 
Protein sequence
MQAVILAGGF GKRLAPLTNE LPKPLLPVGG KPILVRQIEW LRRYGIVDII LAVGYLRHKI 
FEALGDGRKY GVRLFYSVEE EPLGTGGAIK NAAPYLTDDV FIVVNGDVLT NLPVDRVVEA
LENADGAIAL VPLRSPYGIV EFDSNGYISR FREKPLLEGF YINAGVYALR KKVLSELPDR
GNIEETLFPS LAQQRRLKAI VFRDVFWRSV DSLKDLEEVD KYFTNES