Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0370 |
Symbol | |
ID | 4617949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 358856 |
End bp | 359539 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639783450 |
Product | nucleotidyl transferase |
Protein accession | YP_929891 |
Protein GI | 119871884 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.357076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCTG TGATTTTAGC CGGTGGGTTT GGAAAACGGC TTGCGCCACT GACAAACGAA TTACCTAAGC CGCTGTTGCC AGTTGGCGGA AAGCCTATTC TTGTGAGACA GATCGAATGG CTTAGGAGAT ATGGAATTGT CGATATTATA CTGGCCGTGG GTTACCTAAG GCATAAGATC TTTGAGGCTC TGGGAGATGG GCGTAAATAC GGCGTTCGTC TCTTCTACAG TGTTGAGGAG GAGCCCCTCG GCACTGGGGG CGCTATAAAA AACGCCGCTC CCTATCTAAC AGACGATGTA TTTATAGTAG TGAACGGCGA CGTGTTGACT AACCTGCCTG TAGATAGAGT TGTTGAAGCT CTAGAGAACG CAGATGGGGC AATTGCGCTT GTGCCTCTCA GAAGTCCCTA CGGCATTGTT GAGTTTGACT CTAACGGCTA TATCTCTAGG TTTAGAGAAA AGCCGCTGTT AGAGGGCTTT TATATTAACG CAGGCGTTTA TGCTCTAAGG AAAAAAGTGC TGTCGGAGTT GCCAGACAGG GGGAATATAG AGGAGACTCT CTTCCCCTCG CTGGCGCAAC AGAGACGTCT TAAGGCTATT GTATTTAGAG ATGTCTTTTG GCGTTCTGTA GATAGTCTAA AAGACTTAGA AGAAGTAGAT AAGTATTTTA CTAATGAATC TTGA
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Protein sequence | MQAVILAGGF GKRLAPLTNE LPKPLLPVGG KPILVRQIEW LRRYGIVDII LAVGYLRHKI FEALGDGRKY GVRLFYSVEE EPLGTGGAIK NAAPYLTDDV FIVVNGDVLT NLPVDRVVEA LENADGAIAL VPLRSPYGIV EFDSNGYISR FREKPLLEGF YINAGVYALR KKVLSELPDR GNIEETLFPS LAQQRRLKAI VFRDVFWRSV DSLKDLEEVD KYFTNES
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