Gene Pisl_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0340 
Symbol 
ID4617471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp337099 
End bp337857 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content41% 
IMG OID639783420 
Producthypothetical protein 
Protein accessionYP_929861 
Protein GI119871854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.498683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTAA CGCTTCTGTT TATCACTACA ATTGCTGTCT CAATTACAAT ACTAGGTCTC 
ATAATGTATA GGCTAGTTAA ATCGCTTGAG ATATATCTAA TTCCTCTCTA CGCCGAGATA
ATTAGGAAGA GAGAAAGAGA CTATATCTTA ATGGAGTTTT TAACCTCGCT ATTAGTATCA
AAAGGCTTAG TTACACAAGT AGAGGCAGAT GCTCTAAAGA AAATATCTAC GACAGAACCT
CTGACAGTAG AAGACTTAGA TAAAATAGAT GAGATATTAA ACAAAGACCC CTCTCAACTC
ACCTTTGAAG AAATAACCGA CTTGAAAAGG GTGGCGTATA AACTACTCGG TAGACTAGAC
AAGAAATCTG TGAGATTAGG TATGAAGCTA CTTAAATATG CCGTTGGAAT AGAAGAGACT
TTTAAAACCG GCGTTGAGCT GCCGGCGAGG TCTAAGACAG AAAAAGTCGA GATCTCTTAC
GACTACGACA CATGCTCAGT ATATCTAACC ACCTATAGAA GAGACGGCAC AATTGAAAAA
ACGCAGGGCC CCGACTTGGA GTGCGTCACA GAGACAGCCA TGATTCTCAA AGCATTGGCC
AGGAGAAGCA CAGAGGTTAA CAAAGAGTTG GCAGAGAAAG CGTTAGCACG CTATAAGAAA
TGTAAAGAGA GCGATACGGC AGGATGCAAA GCCTTAAAAG AAGCTCTCAG CACTTTAGAG
AGGAAATCTC TCGACCTTCT ACTAGAGAGA AAACACTAA
 
Protein sequence
MDLTLLFITT IAVSITILGL IMYRLVKSLE IYLIPLYAEI IRKRERDYIL MEFLTSLLVS 
KGLVTQVEAD ALKKISTTEP LTVEDLDKID EILNKDPSQL TFEEITDLKR VAYKLLGRLD
KKSVRLGMKL LKYAVGIEET FKTGVELPAR SKTEKVEISY DYDTCSVYLT TYRRDGTIEK
TQGPDLECVT ETAMILKALA RRSTEVNKEL AEKALARYKK CKESDTAGCK ALKEALSTLE
RKSLDLLLER KH