Gene Pisl_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0331 
Symbol 
ID4617155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp328888 
End bp330111 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content53% 
IMG OID639783410 
ProductNADH dehydrogenase (ubiquinone) 
Protein accessionYP_929852 
Protein GI119871845 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.925888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAG TTGAGTGGCC CTTTAACCTA CAGTTTGGCA ACACCTTCTA TATACAGAAC 
GAGGAGGAGC TGAGAAGAGG CGAGAGGGGA CTTGTCGTGG TCGTCGGCCC GCAACATCCA
GGCTCAGGCC ACATGAGACT ATTCGTGGTT TTAGACGGCG ATATCATAAA GGAGGTGGTA
CCGGATCCAG GCTTCGTCCA TAGAGGCATG GAGAAGCTGG CTGAAAACAG GCCCTACTGG
ACCCTTATCC CCCTGGTAGA GAAGGCCTCG ATAATGGACA GTATGAACAT AACCCTCCCC
ATCACCCTAG CCCTTGAGAA AGCCCTAGGT CTAGAGCCGC CTCCCAGAGC AAAGTACTTA
AGGACATTAA TGGCGGAGCT ATCACGTATA AGAACACACC TCTACGACCT CGCGCTGTTG
GGTATATTTC TCGGGCACTC CACGGCCTTT ATGTGGAGCT TCGCTCTCAT GGATCTCTAC
GCCGAGGTCT TTGCGAAGAT CACCGGCGCT AGGACAACAG TGGCCTACCC AGTCCCCGGC
GGCGTGAGAC GAGACGTAAA GAGGGAACAC CTCGAGGCCG TGGAGAGGTT GCTCAAGAAG
ACGGAAGAGA AGCTGAGAGA CCTCAAAACT ATCTTCCTCG ACAACCCAGT GACCAAGGCC
CGCCTAGAGG GCGTCGGCGT GATAGACGCA AAACGCGCCG CAGAGCTAGG CGTCGTGGGA
CCCTTCGCCA GAGCCGCCGG GATAGACTAC GATATAAGAA AGATATATCC ATATGACGCA
TACCCAGAGA TAGAGTTTGA AATAGCGACA GAGAAGGAGG GAGACGCACT TGCTAGAGTA
ATAGTTAGAT GGCGAGAGAT TTACGAATCT ATAAAAATAG TTAGACAGAT TATAAAAGAA
TTGCCTCAAG GCGATGTAAT AGACGAGGCT CTGTTGTTTA AAAACCCTGA ATATCGTAGA
GAAGGCATAG GAGGCGTATT GGGCGTCTAC ACCTACATAT ATCCTGAGCC GGGAGAGTAC
GCCGCAGTTG CCGAGGCAGC CAGAGGTACC ACCTACATCC ACCTCTGGAC AACCGGTGCC
CAGAGGGTCT ACCGCATGCG CTACGTCACC CCGAGCTGGC GCAACCTAAA GGCCATGGCA
GAGGCCATGA AAGGCGAGAG ACTCGCCAAC ATGCCCACCG TGTACATGTC ATTCGGGTAC
TTCCCACCAG AGGCAGATAG GTAG
 
Protein sequence
MQRVEWPFNL QFGNTFYIQN EEELRRGERG LVVVVGPQHP GSGHMRLFVV LDGDIIKEVV 
PDPGFVHRGM EKLAENRPYW TLIPLVEKAS IMDSMNITLP ITLALEKALG LEPPPRAKYL
RTLMAELSRI RTHLYDLALL GIFLGHSTAF MWSFALMDLY AEVFAKITGA RTTVAYPVPG
GVRRDVKREH LEAVERLLKK TEEKLRDLKT IFLDNPVTKA RLEGVGVIDA KRAAELGVVG
PFARAAGIDY DIRKIYPYDA YPEIEFEIAT EKEGDALARV IVRWREIYES IKIVRQIIKE
LPQGDVIDEA LLFKNPEYRR EGIGGVLGVY TYIYPEPGEY AAVAEAARGT TYIHLWTTGA
QRVYRMRYVT PSWRNLKAMA EAMKGERLAN MPTVYMSFGY FPPEADR