Gene Pisl_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0324 
Symbol 
ID4617450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp323443 
End bp324381 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content55% 
IMG OID639783403 
Productpyruvate ferredoxin oxidoreductase subunit gamma/delta 
Protein accessionYP_929845 
Protein GI119871838 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATAG AAACTCTCTG GCTTGGCCGT GGGGGTCAGG GAATCGTCAC TGCTACATAC 
ATCATCGCAA ATGCCGCTGT TATGGACGGA TTCTACGCCA TTGCAAACCC AGAGTTTGGC
GCAGAGAGAA GAGGCGCGCC TGTCAAGGCC TTCCTCACTA TAGACAAAAA CCCCATTGAG
GATTTAGAGC CCATCAAGAC GCCGGATGCC GTCATTATAT TTGACGATAA ACTTATCGAC
TCCATGAGAT TTGCTATAGA TGCTGTAAAG CCCGGTGGCT ATGTCATTGT AAACAGCGCT
AAGCAACCCG AGGAGGTGCG GAAGATTGTA GGGAGAAACG ACGTCTATAT CGTAGTGGTG
GACGCAGTCG GCATCGCCAT GAAACACGTG GGTCTCCCCG TTCCAAACGG TCCGCTGGCT
GGCGCCTTCT CCAAGGTGAT GGGCTTCCCC AGGCTTGAGT CGATAAAAAC CGCGTTTGAG
AACCAGCTGG GCAAGGCCGT GGAGGAGAAC TTCGCCGCCA CGAAGGAGGC CTACGAGGTG
GCCGTTGTCC TCAAGCCCGA GAAGGTGGAC ACCTCCGCGA AGCCGAAAGG GGTAATATCC
ACCACATCGG CCTTCTTGAC CGGGCCCTAC GAGCTGGTGG GTTGGCAACA GGTGAACAAG
GGCGGCGCCG TCGGTCCTGG CAGCAGCTTG CAGTATCTCA CGGGCGGCTG GAGGATAGAG
AAGCCTATTA TAGACCACTC CAAGTGTATA ATGTGCAGAA AGTGCTGGCT GTATTGTCCA
GACGACGCCA TAATAGAGGC TTGGAGGGAG GCGCCGGGGC CGAGAGGCCG CGTCTTTAGG
ACTAAGGTCA TCGACTTCGA CTACCAGTAC TGCAAGGGCT GTGGGATCTG CGCAGAGGTC
TGTCCAACAG GGGCAATACA GATGGTGAGA GAGATATGA
 
Protein sequence
MRIETLWLGR GGQGIVTATY IIANAAVMDG FYAIANPEFG AERRGAPVKA FLTIDKNPIE 
DLEPIKTPDA VIIFDDKLID SMRFAIDAVK PGGYVIVNSA KQPEEVRKIV GRNDVYIVVV
DAVGIAMKHV GLPVPNGPLA GAFSKVMGFP RLESIKTAFE NQLGKAVEEN FAATKEAYEV
AVVLKPEKVD TSAKPKGVIS TTSAFLTGPY ELVGWQQVNK GGAVGPGSSL QYLTGGWRIE
KPIIDHSKCI MCRKCWLYCP DDAIIEAWRE APGPRGRVFR TKVIDFDYQY CKGCGICAEV
CPTGAIQMVR EI