Gene Pisl_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0308 
Symbol 
ID4618273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp307460 
End bp308113 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content60% 
IMG OID639783386 
Producthypothetical protein 
Protein accessionYP_929829 
Protein GI119871822 
COG category[S] Function unknown 
COG ID[COG1590] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.897433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTTG TAGATAGGAA GGTTTTTGAG GCCCGGAAGC GCGTATTCAT AGAGCGGCTT 
GAGAGAGAGG CCCTCCAGGA GAGGGTAGAC GGCGATATCC TCCCACTCCT CCGTCTCCTG
AACCGGCACC CAGCTATATA CACTACTTCC AGCTGCAGCG GGAGGATAAT GGTGGCCGAG
GCGGTGAGGC CGAGCTACAG CAAGGGCAAG GGGTTTAGGC CGGTGGCTAA GTGGCACCAT
CCAGTGCCGC CCGACCTGGT GAGGGCGGCC GCCGACCAGG TGGACAACGC GTGGCTCATG
GTGAGGGGGG CTATACTACA TCTGGCGGCC GTCGACGCCA AGACGGCCTA CCGGCTGGTT
GAGGTGGGTA GGGAGACGGG GCATAAACAC AGCGGCATAA TAGCAATAAA CAGAGGCGGG
ATCTTTGTCG AGATACTGGG TGAGGAGAGA CTTGACGTAC CGTTAAAGAG AGGCGGTGTC
TACGTGTCAG ACCTAGAGAC GGCGGTAGAT ATGGCCAACA AAACTCTGGT GTTGGCAAAG
CTACGGCTGT ACTGGCTGGC GGCCCGCCTA GAGGCGGAGC TCTTCGGCTT AGAGGCGCCG
GAGAGCGACG AGATCAGGAG GGCCATCCGC CGAGCGGCAA ACTGCCTCGG GTAA
 
Protein sequence
MGVVDRKVFE ARKRVFIERL EREALQERVD GDILPLLRLL NRHPAIYTTS SCSGRIMVAE 
AVRPSYSKGK GFRPVAKWHH PVPPDLVRAA ADQVDNAWLM VRGAILHLAA VDAKTAYRLV
EVGRETGHKH SGIIAINRGG IFVEILGEER LDVPLKRGGV YVSDLETAVD MANKTLVLAK
LRLYWLAARL EAELFGLEAP ESDEIRRAIR RAANCLG