Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0308 |
Symbol | |
ID | 4618273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 307460 |
End bp | 308113 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639783386 |
Product | hypothetical protein |
Protein accession | YP_929829 |
Protein GI | 119871822 |
COG category | [S] Function unknown |
COG ID | [COG1590] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.897433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGTTG TAGATAGGAA GGTTTTTGAG GCCCGGAAGC GCGTATTCAT AGAGCGGCTT GAGAGAGAGG CCCTCCAGGA GAGGGTAGAC GGCGATATCC TCCCACTCCT CCGTCTCCTG AACCGGCACC CAGCTATATA CACTACTTCC AGCTGCAGCG GGAGGATAAT GGTGGCCGAG GCGGTGAGGC CGAGCTACAG CAAGGGCAAG GGGTTTAGGC CGGTGGCTAA GTGGCACCAT CCAGTGCCGC CCGACCTGGT GAGGGCGGCC GCCGACCAGG TGGACAACGC GTGGCTCATG GTGAGGGGGG CTATACTACA TCTGGCGGCC GTCGACGCCA AGACGGCCTA CCGGCTGGTT GAGGTGGGTA GGGAGACGGG GCATAAACAC AGCGGCATAA TAGCAATAAA CAGAGGCGGG ATCTTTGTCG AGATACTGGG TGAGGAGAGA CTTGACGTAC CGTTAAAGAG AGGCGGTGTC TACGTGTCAG ACCTAGAGAC GGCGGTAGAT ATGGCCAACA AAACTCTGGT GTTGGCAAAG CTACGGCTGT ACTGGCTGGC GGCCCGCCTA GAGGCGGAGC TCTTCGGCTT AGAGGCGCCG GAGAGCGACG AGATCAGGAG GGCCATCCGC CGAGCGGCAA ACTGCCTCGG GTAA
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Protein sequence | MGVVDRKVFE ARKRVFIERL EREALQERVD GDILPLLRLL NRHPAIYTTS SCSGRIMVAE AVRPSYSKGK GFRPVAKWHH PVPPDLVRAA ADQVDNAWLM VRGAILHLAA VDAKTAYRLV EVGRETGHKH SGIIAINRGG IFVEILGEER LDVPLKRGGV YVSDLETAVD MANKTLVLAK LRLYWLAARL EAELFGLEAP ESDEIRRAIR RAANCLG
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