Gene Pisl_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0300 
Symbol 
ID4617528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp298933 
End bp300768 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content45% 
IMG OID639783378 
Producthypothetical protein 
Protein accessionYP_929821 
Protein GI119871814 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGATTA TGAGAATTGG TTACGTCGTC GCCACCGCCA CGCCTTTTGA ATTTATCGCC 
ACTCTCGACC CCGAGAGACC AGTCAGCCTA TATGACTATG TGGCTGTCGA CCATGTTGAA
TATGATGCGA CAAACGGCGA ATATATCAAT GTGAGACTCC TCGGTCAGAT TGTAAAACTT
TTTAGAGACC CCTATTCAGC CAAGAGGGAC CTCCCTCTCT ATAGTGTGAT GAAAGAGGTG
TCAGACAACA TTCTTGAGGT ACAAATTGCA AAAGTCAAGG TGTTGGGTTA TATATACAAT
GGAGAATTAA GACAACCGAA ACATCCGCCT AGAATTGGGA CGCCTGTCTA TTTAGCAGAA
AACGAGGAGA TTGCAGAGTT ATTTAAAATA GATGGCGGAC TCTGCGTAGG GCGGTTGGCA
AGTCGCGATT TAGAAATCTG CCTAGATTTA AATGGAGTTA AACGCCATGT TGCCGTCATC
GCGGCAACTG GAAGTGGAAA AACGTGGTTC TCTGTTGTGT TTATAGAGGA GTTGTTGAAA
AAAGGCGCCA AGATCGTAGT AGTTGACCCC CATGGCGAAT ATGTCCCCAT TAAGGATAGT
ATATATAAGC TAGGCCCCTA CTCGGCGACT GTTGTAAAAT TATCTAAGCA CCACGTAGGC
GATTTGATGT ATAAAATTGG CGTATTAGAC AGCGATCCAG ACGCGTTAGC AAATGCGGCG
GGGGTCCCTC CAGGCGCTAA AAAAATACGC TACGCCATAT ATCTAGCCTG GTCCTATGCC
AAGAAGGTTA AAAAGACAAC AGGCAAAGCC TTAGGCCTTT CATTTCTCAG ACAGGTGTTA
CATACGGCGC TTAGAGGGGA GACTGCGTTA AATAAGCTTT TTCAACAATA CAAAGTTGAG
GGAGATTTCC CAATGGAGGA TTTAAAGCAG CTGGCAAAAA AAGACCGCCA CTCTATATTC
AGCGCGTTGA TGTATCTAAA GAAGTTGCAG AGACTCGGCG TCTTCTCTTC AAAATCGACG
CCGCTTTCTA AAATATTAGC TGATATTACA ATTGTAAATC TGGCTGGAGT AAACGAGGAG
GTCCAGGACT ATGTCGTGTC TCATATTGTA AATCGTATAT TTCAAGCCAG AGTGAGACAT
GTTAGATCTC TCAAAGGGTT GAAAATACCT TGGCCCGTCG TACTTGTAGT AGAAGAAGCC
CACCGTTTTG CCCCACCTAA GACGCTTAGG AAGACTAAAT CCTATGAAGC TCTATCTAGA
GTGGCCTCTG AGGGGAGGAA ATTCGGCGTC TATCTGGTGA TAGTTAGCCA GAGACCGAGC
AAGGTGGATC CAGACGTCAT CAGTCAGTGT CAAAGCCAAG TCATTATGCG TATTGTAAAT
CCCAAGGACC AAGAGGCTGT GAGAGAAAGT AGCGAACTTT TAGCACAAGA GTTTCTAGAG
AATCTACCAG GCTTAGATGT GGGAGAGGCT GTAGTGTTAG GCCCTCTCAC CAGACTGCCG
GTGGTAATTA GACTACGTGA TAGAGTTTTA GAATACGGCG GGGCCGATAT AGATCTTGCC
AAAGTGTGGA GAATTGATAA GACGGCAGAC GTGTTACAAC TCTGGAGGAG GATATATAAC
ACGCCGCCGT CTCCCAGCGT TATATTATCC GCCTCCAGGT TGAAGATATT ACATAAGAGG
AGGGAGAGGA ATCGTATAGA GGTGTTGTTG CTAGACGGAG ATAGAGAGGT GTCTGTAGTT
ATTGAAGATG GGAGACCGAT ATGTAGTGTC TGTGGCGTTG GCAAGCCATG TCCTCACGTA
TATAAGGCGT TGGAGGAGGC TGTGGAAATT ATATGA
 
Protein sequence
MGIMRIGYVV ATATPFEFIA TLDPERPVSL YDYVAVDHVE YDATNGEYIN VRLLGQIVKL 
FRDPYSAKRD LPLYSVMKEV SDNILEVQIA KVKVLGYIYN GELRQPKHPP RIGTPVYLAE
NEEIAELFKI DGGLCVGRLA SRDLEICLDL NGVKRHVAVI AATGSGKTWF SVVFIEELLK
KGAKIVVVDP HGEYVPIKDS IYKLGPYSAT VVKLSKHHVG DLMYKIGVLD SDPDALANAA
GVPPGAKKIR YAIYLAWSYA KKVKKTTGKA LGLSFLRQVL HTALRGETAL NKLFQQYKVE
GDFPMEDLKQ LAKKDRHSIF SALMYLKKLQ RLGVFSSKST PLSKILADIT IVNLAGVNEE
VQDYVVSHIV NRIFQARVRH VRSLKGLKIP WPVVLVVEEA HRFAPPKTLR KTKSYEALSR
VASEGRKFGV YLVIVSQRPS KVDPDVISQC QSQVIMRIVN PKDQEAVRES SELLAQEFLE
NLPGLDVGEA VVLGPLTRLP VVIRLRDRVL EYGGADIDLA KVWRIDKTAD VLQLWRRIYN
TPPSPSVILS ASRLKILHKR RERNRIEVLL LDGDREVSVV IEDGRPICSV CGVGKPCPHV
YKALEEAVEI I