Gene Pisl_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0296 
Symbol 
ID4616407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp294107 
End bp295396 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content39% 
IMG OID639783374 
Producthypothetical protein 
Protein accessionYP_929817 
Protein GI119871810 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTTT TATTAAACGT AGATTACAAC GACGAACTTA CCAGACTTAG GATACACGAA 
ATAGTTAGGT ACATGCAGAA AATAGGGATA CCGCTGAAAC TTACAAAAGT ATCAAATGAC
GCCATTGCAG ACTCTTTCTA TGTCCACTAT AGAACGCCAA TATTAAAAGA AGAGCCTAGC
CAAGACGAAG CATTATGGTA TATATTTCTA AAGTCATATA TAGCCAGTGA CATATATCAA
GAAGTTTCGC GTATAAGTAG ATATAATTAC CAAGTCTCTA AGTCGGCATC TATAAAACTT
CTCAGAGCGT ACAACAGCCT CCTCTCTAGG CTAGAGAGAG GGACATTAGG CAATTTTGAA
GACAGGAAAG ACTACAAACA ATTAAGCCAA GACCAACAAC TACGCCAAGA GATAAACAGC
CTCCTCCGGT TTTATATGGG GAGTATAAAA AACATAGAAA AGCTTAGAAA ATCGGTAACA
AAAGCGCTAG GTGATGAAGT GGGTAAAGAA GTTGCCGAGC TCCTCTTCGA TATTGACGTA
GATCCATACC GCGCCAGACT TGCCAAAATA CTTGAGTCGT TGGTAGAGAT AATATCATCA
CTTAGGCCAG AAATGGAACA AGGCCCTATA ACTGAGAGAA AAGGTGTAGT GTCTGGAATA
ACTAGAATAA GGACGTTTTC TAACCTCCAG AGGGCGACAA ATTTAAGTAA AGCTATATAT
GTACAATCGA GAGAGCTCTT TGGATATAAG CTTGCAACAA AATCTCTATC TATATACGAA
ATGTCAATAG ACGCAAGAGA GAAGATTTAC CTATTGGTAG ATAAGTCAGG TTCTATGTTT
TACACACTAT ATGACGGAAT AGCTATGGAT ATGACGCAGA AGATAACGTG GGCTACTGCG
TTAGCAATAG CATTAATGAA GAGAAGTAAA AGAGTCATAC TAAGATTTTT CGATCAAATG
GTTTATCCAC CTATTACAAA CATAAAGGAG GTGATAAGAT CTTTACTCAG AGTACTCCCA
CTCGGGGGTA CAGATATAAC AGCCGCTGTT TATACCGCGG TTAGAGACGC CAAACAACAA
GGGTTGCACA GTTATAAGCT GATAGTTATA ACAGACGGCG AAGACGACAT GGTCCATCCA
GAGGTTTTAA AAGCGGCTAA GACCGCCTTT AGAGAAGTAA AAGTAATATT AGTCGGCGGT
AGCAATGAAA CTATAGAGTC ATATTTACCC ACAATAAAAG TAAATACGAC CAGTTTAGAA
TCACTAAAAA TGGCATTAAA AAATATTTAA
 
Protein sequence
MGVLLNVDYN DELTRLRIHE IVRYMQKIGI PLKLTKVSND AIADSFYVHY RTPILKEEPS 
QDEALWYIFL KSYIASDIYQ EVSRISRYNY QVSKSASIKL LRAYNSLLSR LERGTLGNFE
DRKDYKQLSQ DQQLRQEINS LLRFYMGSIK NIEKLRKSVT KALGDEVGKE VAELLFDIDV
DPYRARLAKI LESLVEIISS LRPEMEQGPI TERKGVVSGI TRIRTFSNLQ RATNLSKAIY
VQSRELFGYK LATKSLSIYE MSIDAREKIY LLVDKSGSMF YTLYDGIAMD MTQKITWATA
LAIALMKRSK RVILRFFDQM VYPPITNIKE VIRSLLRVLP LGGTDITAAV YTAVRDAKQQ
GLHSYKLIVI TDGEDDMVHP EVLKAAKTAF REVKVILVGG SNETIESYLP TIKVNTTSLE
SLKMALKNI