Gene Pisl_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0272 
Symbol 
ID4617335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp273286 
End bp274302 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content52% 
IMG OID639783351 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_929794 
Protein GI119871787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCT TAAAGGTATA TATTTTGGGT GCAACAGGTC TAGTGGGACA AAGGTATGTA 
CAACTATTGG CTAAACACCC TTGGTTTGAA ATTGTTGGCC TAGCGGCTTC GGAAAAAAAC
GCAGGCAAAA CCCTGGCGCA GACCGGGTGG GTGTTAGAAG AGCCGCCGCC TCCCCACATC
GCCGAGATGA AAATAGAGAG ATTAGACGTA GAAAAGATAC CACGTGTCGA TTTTGTATTC
TCGGCGTTGC CAAGCGAAGT AGCCGCTAAA GTAGAGCCGC AACTCGCCAC CAGAGGGCAC
ATGGTATTAT CAAACGCCAG CAACATGCGT ATGGATCCCG ACGTGCCGTT AGTAGTACCT
GAGATAAACC CCGAGGACGT ATCTCTCCTA GAGAGACAGA GGGTTGAGAG AGGCTGGAGC
GGCGGCGTGG TGAAGAAACC CAACTGTACA ACCACCATAC TCAACCTCCC CCTAAAGCCT
ATTCTAGACG AGTGGGGCAT AGAGAGAATA CACGTAGTGA CTATGCAAGC TCTCAGCGGC
GCAGGATACA GCGGAGTGCC CAGCGTGGCG ATAGTAGATA ACCTAATACC ATATATAAGA
GGCGAGGAAG AGAAAGTCGC AGCAGAGACC AAGAAGATAC TCAAGACAGA TTTCGAGATA
TATGTAACTA CTACGCGCGT CCCCATTTTA GACGGCCATA CCGAGGTGGT GTATGTAGAT
ACAAGAAAAG ATTTTGACCC AACTGCGGTG GCCGACGCTC TTGCCAAATT CAAGGGGCTC
CCCCAGGAAC TTAAGCTACC CACAGCCCCC GAGAGACCTA TAGAGGTGAG ACCTCAGATA
GACAGACCAC AGCCGCGGTT AGACCGGTGG GCTGGCGGCG GCATGGCGGT CGTGGTTGGG
AGAATTAGGA AGTTGGCTCC GCGAAAACTT GCGTTTGTTG TACTAGGCCA TAACACAGTG
AGGGGGGCCG CCGGCAACTC TATATTGACG GCAGAGCTTT TGGTAAAAAT GCGATAA
 
Protein sequence
MDRLKVYILG ATGLVGQRYV QLLAKHPWFE IVGLAASEKN AGKTLAQTGW VLEEPPPPHI 
AEMKIERLDV EKIPRVDFVF SALPSEVAAK VEPQLATRGH MVLSNASNMR MDPDVPLVVP
EINPEDVSLL ERQRVERGWS GGVVKKPNCT TTILNLPLKP ILDEWGIERI HVVTMQALSG
AGYSGVPSVA IVDNLIPYIR GEEEKVAAET KKILKTDFEI YVTTTRVPIL DGHTEVVYVD
TRKDFDPTAV ADALAKFKGL PQELKLPTAP ERPIEVRPQI DRPQPRLDRW AGGGMAVVVG
RIRKLAPRKL AFVVLGHNTV RGAAGNSILT AELLVKMR