Gene Pisl_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0270 
Symbol 
ID4617664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp270256 
End bp272259 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content51% 
IMG OID639783349 
Productacetyl-CoA synthetase 
Protein accessionYP_929792 
Protein GI119871785 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR01217] acetoacetyl-CoA synthase
[TIGR02188] acetate--CoA ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAAG TGTTGAAAGA AGAATTGCCA TTCAACGAAT ATGTAATAAA TGAGAGGTGG 
AAGAGCAGAT TAATAGACAT AAATGCGTAT AAAGCTCTTC ATACAAAATC GCTTGAACAG
CTAGAGGAAT TCTGGGCATC TATAGCTAGA GAACTGGAGT GGTTCAAGCC CTGGGACAAA
GTGCTTGATG CTTCAAACCC GCCGTTTTAT AAGTGGTTTG TAGGCGGGAA ATTAAATCTC
TCTTACTTGG CCTTAGATAG ACATGTAAAA ACATGGCGTA AAAACAAGTT AGCTATTGAA
TGGGAGGGAG AGCCTGTTGA CGAAAATGGG AACCCTACAG AACAACGTAA ATTGACATAT
TTTGATCTCT ATAGAGAGGT AAATAGAGCG GCTTATATGT TAAAACACAA CTTTGGAATT
AGAAAGGGCG ATCGTATTAC GCTGTATATG CCGATGATTC CAGAGCTCCC CATTGTAATG
CTCGCCGCCT GGAGAATAGG CGCTGTCACA AGCGTCGTAT TTTCAGGATT CTCTGCCGAG
GCTTTGGCAG AGAGAATAAA CGATTCACAA TCTAGAATTG TAGTAACAGT AGACGGCTTC
TGGAGACGTG GAAAGGTGAT AAGACTAAAG GAAATAGTTG ACCAAGCCTT AGAAAAGGTA
GGTACCGTAG AAAACGTCAT TGTATATAGG AGACTTGGCT TAAAAGATGT GCCAATGACA
GAGGGTAGAG ACTACTGGTG GCATAAGGTA ATGGAGGGTA TAAAAGCCAA CGCATATGTT
GAGCCAGAGC CTTTAGAAAG TGAACACCCC TCGTTTATTT TATACACATC CGGAACAACA
GGAAAGCCGA AGGGCATAGT CCACGACACT GGCGGTTGGG CGGTACATGT ATATGCAACA
ATGAAGTGGG TATTTGACCT AAGAGAAGAA GATATCTACT GGTGTACTGC AGATATCGGG
TGGGTCACAG GCCATTCCTA CGTTGTGCTA GGGCCGTTAA TGATAGGCGC TACTCAGGTC
ATATATGAAG GCGCTCCCGA TTATCCACAG CCAGACCGCT GGTGGGCTAT AATAGAGAGA
TACGGCGTGA CGATACTCTA CACGTCGCCA ACCGCCATAC GTATGTTCAT GCGCTACGGC
GAGGAATGGC CCAGGCGCCA CGACTTATCG ACCCTGAGGA TTATACACTC GGTTGGCGAG
CCCATAAACC CCGAGGCCTG GCGGTGGGCC TACAAGGTGC TCGGCAACGA AAACGTGGCC
ATGGCCTCCA CATGGTGGAT GACGGAGACA GGCGGTATTG TTATATCTCA CACACCCGGC
CTCTATTTAA TACCCATGAA GCCCGGCACC AACGGTCTGC CACTCCCCGG CTTCGACGTA
GATGTGTTTG ACGACAACGG CAAGCCGGCG CCCCCAGGCG TGAGAGGGTA CCTCGTCATA
AAGAGGCCGT GGCCTGGCAT GCTCCACGGC ATATGGGGCG ACCCCGATCG CTACATAAAG
ACCTACTGGT CTAAGTTTCC CGGCGTCTTC TACGCAGGCG ACTACGCAAT AAAAGACCAA
GACGGCTACA TTTGGGTCCT CGGCAGGGCA GACGAGGTGA TAAAAGTCGC CGGCCACCGT
CTCGGCACAT ACGAGCTCGA GTCCGCCCTG GTGTCGCACC CCACAGTGGC TGAGGCAGCT
GTGGTGGGCG TGCCCGACCC CATCAAGGGC GAGGTGCCCA TAGCTTTCGT AGTGCTGAAG
CAAGGCGTAA TGCCTAGCGA CGAGCTAAGG AAAGAGCTTA GAGACCACGT GAGGAAGACC
ATAGGCCCCG TGGCGGAGCC TGCCCACATA TTCTTTGTGA CGAAGCTCCC CAAGACCCGC
TCAGGTAAGA TAATGCGCCG CCTCCTAAAG GCAGTCGCCA CAGGCGCGCC ACTGGGAGAC
ACCACTACCT TGGAGGACGA GACGTCTGTT GAGGAGGCAA AGAAGGCCTA TGAAGAGCTG
AGGAGAGAGA TCGCTAGAGG ATGA
 
Protein sequence
MHQVLKEELP FNEYVINERW KSRLIDINAY KALHTKSLEQ LEEFWASIAR ELEWFKPWDK 
VLDASNPPFY KWFVGGKLNL SYLALDRHVK TWRKNKLAIE WEGEPVDENG NPTEQRKLTY
FDLYREVNRA AYMLKHNFGI RKGDRITLYM PMIPELPIVM LAAWRIGAVT SVVFSGFSAE
ALAERINDSQ SRIVVTVDGF WRRGKVIRLK EIVDQALEKV GTVENVIVYR RLGLKDVPMT
EGRDYWWHKV MEGIKANAYV EPEPLESEHP SFILYTSGTT GKPKGIVHDT GGWAVHVYAT
MKWVFDLREE DIYWCTADIG WVTGHSYVVL GPLMIGATQV IYEGAPDYPQ PDRWWAIIER
YGVTILYTSP TAIRMFMRYG EEWPRRHDLS TLRIIHSVGE PINPEAWRWA YKVLGNENVA
MASTWWMTET GGIVISHTPG LYLIPMKPGT NGLPLPGFDV DVFDDNGKPA PPGVRGYLVI
KRPWPGMLHG IWGDPDRYIK TYWSKFPGVF YAGDYAIKDQ DGYIWVLGRA DEVIKVAGHR
LGTYELESAL VSHPTVAEAA VVGVPDPIKG EVPIAFVVLK QGVMPSDELR KELRDHVRKT
IGPVAEPAHI FFVTKLPKTR SGKIMRRLLK AVATGAPLGD TTTLEDETSV EEAKKAYEEL
RREIARG