Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0269 |
Symbol | |
ID | 4617952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 268193 |
End bp | 270259 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639783348 |
Product | signal transduction protein |
Protein accession | YP_929791 |
Protein GI | 119871784 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG TATATACCTT CCGTCAACTA GTATCAGTCG CCGGCATATC GTGGCTCGGG GCCTTTTTGG AGTGGCTAGA CTTCTACACC TTTGCAACAC TGGCGCCTCT CATATCCGGA AAGTTTTTCC CATCTAAGGA CCCAATTGCC GCTTTGCTCT CTACATTTGT AGCGCTCGCC ATAGGCTTTC TGTTTAGGCC GCTGGGCGCT ATCTTGTTTG GCAAAATAGG CGACCAATAC GGCCGTAAAA TAGCATTTAC TCTAGCTATG ACTCTGATGT TGGTAGGAAC GCTGGGCATA GGCCTACTGC CCACCTACGA CCAGATCGGT ATACTGGCAT CAATCGGCGT CTTTGTTCTT AGAATAATCC AGGGTCTTGC GTTGGGCGGA GGCTTCGGCG CTGCCCTAGT CTATCTAGGC GAGTTCGCCC CTGAACACAG AAGGGGCTTC ATAACTGGTT TCCTCTTCAC AACAGCGCCG GCTGGCATGG GCACCGCGGC GTTGCTTCAA GTCATCATAG CCTCTATGGT GGGCAAAGAG GCCTTTAGCC AGTGGGGCTG GCGTCTAAAC TTCATCGTGG CAGGCGTCGT AGTGTTTGTG GTTGCCCTCG TGATTCACTT CTTCTACAAG GAAACCCCCA TCTTCTCTAT GCTCAAGGCT GTGAGAAGGG TGACTTCGGC GCCTGTGAGA GAGGTGTTCT CCGGTAAATA CTTGCCGTTT GTGTTGCTCG CATGGATAGG CGTGGTAGGG GCACATGGCC CAGTTTGGTA TACAAATCAA CTGTTCAATA GCTACTACGT ATCGACCTTC CAAAAATACG TCGATAGCTC AACCGCGAAC GCGTTACTAT CTACAGCCAC ATACGCCGCC TTGTGGATGT ATCCGCTCTT TGGCTACCTA TCTGACAAGA TTGGGAGAAA GCCCATACTG TTGCTAGGTA TCTTCGGCAA CGCCCTGTGG TTCCCCATCG CGTTTTGGCT AATAGACAAG GTGGGGCCAC AGAAGGATCT AACCGCAATG TGGCTCCTCT TCTGGAGCAT GACCCTCTTC AACGGCATTG GATACAGCGG CGCCATGTCC GCATACCTCC TCGAGCTATT TCCCGCCAGA ATTAGGCTTT CCGCTGTCTC GCTGTCCTAT AACCTGGGCT ACGGCGTAAC CGGCGGGCTG ACCCCAACGA TAATAACCGC CCTATATCAA GCTACACACA ACATATACCT GTCCACAATA CTCTGGTCTA CCTTGGTCCC CGTGCTCATG GGCCTTGTGC TTCTGTTCAA GGGCTGGGAG ACATTAGGCA CGCGCATTTG GGCTGAGCTC GCCGCTGGCA AATTCGCCAA GAAGGCCGTG GTGCTTCCGC CCACCGCGCC GATTAGAGCG GCTACACAGA AGATGGCCGA AGGCGTGAGA GCTGTAGTAA TAGCCGCCTC AAAGCCTGTG GGGGTCTTCG GCAGGAGACA GCTAATAAGA GCTCTGGCGT CTGGCGCAAC GCCGGAGGCC GAAGTAGGCA GATTCGCAAC CCGCGTAGAC TGCGTCAGCG AGGACGCCCC GCTGACTGAG GTATTCGCCG CAATGGAGAA ATACGGCGTT AGAGACGTCC CCATATGTAA AGGAGACGAG GTGGTGGGCA TAATAGAGGC CCGCGAGCTA CTCAACGAGG CTCTAGCCCT CAGGAGTATA GTCAACAAGA AGAAGGCCTT GAACGTAAGC GCCGGCGATG CCGTGGCTAG AGACCCCATC ACCGTGCCGC CGAGCGCGAC GCTACGCGAC GTATTGAAAA TCATGGCCGA GAAAAACATA GGCTTCGTCC CCGTGGTTGA AGACGGGAGA CTCGTAGGCG GTATCTCAGA GAGCGACTTT GTACAAATAC TGCTGAACAA CACCCCGCTG GACACGCCGG TGGAGAAGGT AATGAGGCGC CAGCTTATCA CAATTGAAAA GACAAGGCCG GTGAAAGAGG CCGCGGAGCT CATGGTGAAA CACAACATTA GACATCTGCC GGTGGTAGAA GACGGCAGAG TCGTCGGAGT CCTCTCGGTA CGCGACCTCC TAAAGGCGGT CGCCTAA
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Protein sequence | MTTVYTFRQL VSVAGISWLG AFLEWLDFYT FATLAPLISG KFFPSKDPIA ALLSTFVALA IGFLFRPLGA ILFGKIGDQY GRKIAFTLAM TLMLVGTLGI GLLPTYDQIG ILASIGVFVL RIIQGLALGG GFGAALVYLG EFAPEHRRGF ITGFLFTTAP AGMGTAALLQ VIIASMVGKE AFSQWGWRLN FIVAGVVVFV VALVIHFFYK ETPIFSMLKA VRRVTSAPVR EVFSGKYLPF VLLAWIGVVG AHGPVWYTNQ LFNSYYVSTF QKYVDSSTAN ALLSTATYAA LWMYPLFGYL SDKIGRKPIL LLGIFGNALW FPIAFWLIDK VGPQKDLTAM WLLFWSMTLF NGIGYSGAMS AYLLELFPAR IRLSAVSLSY NLGYGVTGGL TPTIITALYQ ATHNIYLSTI LWSTLVPVLM GLVLLFKGWE TLGTRIWAEL AAGKFAKKAV VLPPTAPIRA ATQKMAEGVR AVVIAASKPV GVFGRRQLIR ALASGATPEA EVGRFATRVD CVSEDAPLTE VFAAMEKYGV RDVPICKGDE VVGIIEAREL LNEALALRSI VNKKKALNVS AGDAVARDPI TVPPSATLRD VLKIMAEKNI GFVPVVEDGR LVGGISESDF VQILLNNTPL DTPVEKVMRR QLITIEKTRP VKEAAELMVK HNIRHLPVVE DGRVVGVLSV RDLLKAVA
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