Gene Pisl_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0245 
Symbol 
ID4617219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp238600 
End bp239928 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content62% 
IMG OID639783325 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_929768 
Protein GI119871761 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.428525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TGGTTGTTAT TGGCGGCGGT ACGGCAGGAG CTACCGCCGC CTCTAGGGCC 
AAGAGGCTGT GTCCTCAATG TCGAGTAATA CTCATAGAGG CCTCTAGATA TATAACACAC
GCCCCTTGCG CTATTCCATA TGCCATTGGA GACCTTACCC AAGGAGAGAT TTGGCTATAC
AGCGAGGAGG AGTTCGAAAG CGAGAGGGGA GTGGAGGTGT ACACAGAGAC CCGAGCCGTG
GACGTGTTGG GAGATAGAGT ATATCTTGAG GGGAAGTTAG AAGGGGTTCT CAAGTTCGAT
ACGTTAGTTA TAGCCACAGG GGCCCGACCG GCGGTGCCCG AGGTGGAGGG GGTGGAGCTG
GAGGGGGTTC TGCCGGTGAG GGGGGTGGAG GTGGTGGATA AGGCGAAGAG GCTCCTCCAG
GGGGCTAGAG ACGTGGCGGT GGTTGGGGCG GGCTACATCG GGGTGGAGAT GGCCGACGTC
TTGGCCCAGA TGGGCAAAAG GGTGGTGCTC ATAGACGGGA GCCCCAGGCC TCTGGCCAAG
TCGCTTGATC CGGACATGTC CGCGGTGGTG GCTCGATACA TGGGGGAGAG GGTGGAGCTG
AGGCTGGGGG AGAGGCTTGT GAAAATCGGG GGTGAGGGGG GCAGGGCTAG GTACGTGGAG
ACCGACGGTG GCCGCTACCC CGCCGACGTT GTGTTCCTCG CCACGGGGGT GAGGCCCAAC
GTCGACCTCG CCCTGAGGGC CGGCGCGAGG CTGGGCCAGA CGGGTGCTGT GGAGGTAAAC
GAATACATGG AGACGGCGGC GCCCGCCGTC TATGCCGCAG GCGACGTGGC CGAGGCGAGA
CACGCGGTGA CGGGGGAGCC GGTGTGGATA CCGCTGGCCA TCTACGCCAA CAAGATGGGG
TACGTCGCTG GGACAAACGC CGGTTTGGGG AGGAGGGCCA TCTCCTTCCC GCCGGTGGCC
GGCGCCTCGG TGACCAAGTT CCTCGACATG TACATAGGAT CCACCGGGCT CACCGAGGAG
GAGGCAAGGA GGAGGGGTAT CTACGGCAGC TCTATCTCTA TTTCCGCGAC AGACAAGGCG
AGGTACATGA AGGGCGCCGT AGACGTCACC CTAAAGGCCG TGGTGGATAG GGAGGGCAGG
CTGGTGGGGA TGCAGATAGT GGGCCGGACC CCCTCGGTGG GCGGCCTGGT GGACTTAGCC
ACCCAGTTCC TGGGGAGGCC CGTGGAGGAT ATGTTCAAGG CCGAGTACTC ATACATGCCC
TTCACCGCCT CGCCCTGGCA CCCCTTCACC ATAATCGCAA GGCTCTACCT CAGGGAGAGG
CTTAGGTAG
 
Protein sequence
MKTMVVIGGG TAGATAASRA KRLCPQCRVI LIEASRYITH APCAIPYAIG DLTQGEIWLY 
SEEEFESERG VEVYTETRAV DVLGDRVYLE GKLEGVLKFD TLVIATGARP AVPEVEGVEL
EGVLPVRGVE VVDKAKRLLQ GARDVAVVGA GYIGVEMADV LAQMGKRVVL IDGSPRPLAK
SLDPDMSAVV ARYMGERVEL RLGERLVKIG GEGGRARYVE TDGGRYPADV VFLATGVRPN
VDLALRAGAR LGQTGAVEVN EYMETAAPAV YAAGDVAEAR HAVTGEPVWI PLAIYANKMG
YVAGTNAGLG RRAISFPPVA GASVTKFLDM YIGSTGLTEE EARRRGIYGS SISISATDKA
RYMKGAVDVT LKAVVDREGR LVGMQIVGRT PSVGGLVDLA TQFLGRPVED MFKAEYSYMP
FTASPWHPFT IIARLYLRER LR