Gene Pisl_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0232 
Symbol 
ID4616950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp227694 
End bp228734 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content57% 
IMG OID639783312 
Producttransport system permease protein 
Protein accessionYP_929755 
Protein GI119871748 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.691146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTGA GGTATCTCGT CTACGGGCTA CCCCTGGCGG TGTTTCTTGT GAGTATCTCG 
GTGGGCGCGT ACCCCATACC TATATATGAC GTGGTTATGG TGGTGTCGGC TAAGTTGGCT
TCTCTTCTCT CCACAGCCGT TAGCGTGGTT ACATTTGGCG TCGTTTCGCC TGCGGTGAAT
CTGCACTACC CCACGACCTA TGAGGTTGTT ATCGTTGGAA TTAGGATGCC GAGGGTTGTC
TTCTCTATGG CGGTGGGCGC GGCGTTGGCT CTCTCCGGCT TGATTCTTCA AGCCATGTTT
AAAAACCCGC TTGTCGATAG CTACATCTTG GGCATCTCCT CCGGGGCGGC CTTCGGGGCC
ACGTTGGCTA TAGGCTTCTT GGCTGTCGCC AGCGTGACCC CCATAGCGTT TGTCTTCGCC
TTGTTGGCCG TCTTCATGAC CTACAGCCTG GCAAGGATTG GAGGCTCTGT CACCCCCGTC
TCTCTTGTCT TAGCCGGTAT AATCGTCAAC GCGCTTTTCA CGGCGTTGAC GTCTCTCCTC
AAGTTTCTGA TGGAGCATAA CAGACTCGCG GCGGCTGTGT ATTGGCTAAT GGGTAGCTTC
TCGGGGGTGG GCTGGGACGC CGTCGTTGTC GCCGTTCCGG TAATCTCGGT GTTGGGGGCT
CTGGCATATC TCTTGAGGTG GCGCCTTGAC GTTCTTAGCT TTGGGGAAGA GGCTAAGACC
CTCGGCGTAG ATGTGGAGAA GCTGAAGGCG CTTTTCGTCT TCGTGGCTAC TCTACTCACG
GCGGTTTCTG TGGCATACAG CGGGATCATC GGCTGGGTTG GGCTCATGGT ACCACACATA
ATGAGGATGG CCTTTGGGCC AAGCCACAGA GGTCTAGTGC CGCTGACTAT TGCAGGGGGC
GCCGCCTTTA TGGGCGCCGC GGACACTCTC GCGCGGACTA TAGCCACTTT TGAAATCCCC
GTGGGTATTT TAACCACGGT GCTTGGGGTG CCCTTCTTCA TCTACCTCCT GAGGAAGACG
GGCGGCAGGT GGCATGCTTG A
 
Protein sequence
MWVRYLVYGL PLAVFLVSIS VGAYPIPIYD VVMVVSAKLA SLLSTAVSVV TFGVVSPAVN 
LHYPTTYEVV IVGIRMPRVV FSMAVGAALA LSGLILQAMF KNPLVDSYIL GISSGAAFGA
TLAIGFLAVA SVTPIAFVFA LLAVFMTYSL ARIGGSVTPV SLVLAGIIVN ALFTALTSLL
KFLMEHNRLA AAVYWLMGSF SGVGWDAVVV AVPVISVLGA LAYLLRWRLD VLSFGEEAKT
LGVDVEKLKA LFVFVATLLT AVSVAYSGII GWVGLMVPHI MRMAFGPSHR GLVPLTIAGG
AAFMGAADTL ARTIATFEIP VGILTTVLGV PFFIYLLRKT GGRWHA