Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0227 |
Symbol | |
ID | 4617012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 213983 |
End bp | 216031 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639783308 |
Product | periplasmic binding protein |
Protein accession | YP_929751 |
Protein GI | 119871744 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0299459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.536447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGA AAATAATTTC CCTATTGGTG GTAATACTGG CGGCTATTGC CGCAGTATAC CTCCTTTTGC CAAAGGGGCC GTCCCCCGCT CAGACGGCGC CTACGGCGGC TGTCTCGCCT ACGGCTTCTC CCACGGCCGT CGCTACGCAA CCGCCTACTC AGACCCCGGC GGTCTCCCGG CAGATCGTCG TCGTTGATTT CCGAGGTAAG AGGATTGTGC TTCCTAAGCC TCCCGAGAGG ATCGTGGTGC TCAACTCCTA CTGGGCAGAG GTGTTAGTGG CGTTGGGGGC TGGGGATAAG ATCGTCGGCA TCGGGAGATA CGTAGACGCC GACGAGTATC TGCCGCCGGA GGTGAGGAAG AAGCCGGTGG TTGGGGATCT ATTCGGCGGT GTTAACGTGG AGGCGGTGGT GGCTCTCAAG CCTGACGTGG TGGTGACAGA CTACGGCTAT GGAAAAGCAG ACGAGGTGAT AAAGAGACTT GAGGAGGCGG GCGTCCCGGT GGTGGCGTTG TTTATGCGGG GGACTCCAGA CGAGTTGAAG GCTGTGGAGG TATTGGGCAA CCTCACGGGG GCTGTGGATA AGGCGAGGGA GCTGAAGGCC TTTATGGCCA AGAGGTTTGA AGAGCTGGGG GCCGGGGCGG CGAAGATAAA GGAGAGGAAG AGGGCTGTGT TGATCTTCGG CAGTAGCATA CTGGCCGGCG GCCCGCTGTC TTTAGCCGCC AACTCGTCCT TCGGCATGGC GTTGGTTGAG GCCGGCGCTG TAAACGTGGC GTTGGAGCAG TTCCCAAACC AGGCCTGGCC TAAGATAGAC ATGGAGACGT TGATGAGGTG GGACCCCGAC GTGGTTTTAA TAGCGGCATC GGCGGAAGAC GCCGGGAGGA TATTCGACAA GATCAGGTCA GACGAGAGGT GGCGCGTCTT AAAGGCGTAT AAAAACGGCG AGATATACCT AGTCCCCTGG GGGTCTAAGA TAGGGGATAT ACTCAACTGG GGGCCCCGGG GCGTAGTCGG CAGGGAGTAC ATCGCGGAGG TGCTCTACCC CGACGTCTAC GCCTTTGACT GGCGGGGAGA TCTAAAGCGC CTAGGAGATA TGTACGGCGT GTCTATCCCG CCGCAGGCCT ACGCCGTGTA CAACATAAAC TGGAAGGAGG TGGTAGACCT GGCGGGGAAC GTGGTGAAGA TCCCCAGCAG GGTGGAGAGG TTCGCCACCT TTGTCACATA TCAACTCCCC ATCGCCTTCA ACGTCACCTC TAGGCTCGTC GCCGTGGGGA GAGACGCTGT CCAAGGCGTC TTCGCCCCTC TGATGAAGGC GGCTTTCCCC GCCGTGGTAA ATCTGCCGAC GCCTGGAGAT CGCTTCAAGG TAAACGTCGA AGCTCTTGTC CAGCTGAAGC CGCAGGTGGT GTTTAACTGG GTGGTAAACC CCGACGATAT AAGAACAATG CAGAGGGCTA ACCTAACCCT GGTACAGGTG GTGGTTAACA ACTTCACAGA CGCCGAGAGG CTCGTCTGGC TATACGGCGT GGTCTTCGAC AGATTGCCCA GGGCTAGACA GATCGTCAAC GACATGGAGG ACATAGTGAA GTTTGTCGCC AACAGAACCG CGTCGGTGAG AGAAAAGGCG AGGGTCCTAT ACCTCTGGGT AGACCCGCTG ACGGTGGCGG GAGGCGCCTC CCTCTTTAGC CAAAACATAG AGCTGGCGGG CGGGGTAAAC GTAGCCGCGG CCGACTACCC CACCATGAGC ACCGTGAAGG TGGACCCCGA GCGGATACTT AAGTGGAACC CAGACGTGAT AATCATCGCC TGGCAGGCGA GATACAACGA GTCTGCCGTC TTGAACAACC CGGTATACCG CGGGGTAAAC GCCGTGAAAA ACGGCAGAGT ATACAAAAAG CCCATCCTCT CGGAGTACAC GCCAGACACC GCCCTCTCGG TGTTGTGGAC AGCCACAAAG CTCTACCCAG ACCTCTTCAG AGACGTAAAC TTCACCAAGG TAGCCGACTA CTACTACAGG AGGTGGTACG GCGTGTCCTA CACACAGGTC TGGGGGTAA
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Protein sequence | MKWKIISLLV VILAAIAAVY LLLPKGPSPA QTAPTAAVSP TASPTAVATQ PPTQTPAVSR QIVVVDFRGK RIVLPKPPER IVVLNSYWAE VLVALGAGDK IVGIGRYVDA DEYLPPEVRK KPVVGDLFGG VNVEAVVALK PDVVVTDYGY GKADEVIKRL EEAGVPVVAL FMRGTPDELK AVEVLGNLTG AVDKARELKA FMAKRFEELG AGAAKIKERK RAVLIFGSSI LAGGPLSLAA NSSFGMALVE AGAVNVALEQ FPNQAWPKID METLMRWDPD VVLIAASAED AGRIFDKIRS DERWRVLKAY KNGEIYLVPW GSKIGDILNW GPRGVVGREY IAEVLYPDVY AFDWRGDLKR LGDMYGVSIP PQAYAVYNIN WKEVVDLAGN VVKIPSRVER FATFVTYQLP IAFNVTSRLV AVGRDAVQGV FAPLMKAAFP AVVNLPTPGD RFKVNVEALV QLKPQVVFNW VVNPDDIRTM QRANLTLVQV VVNNFTDAER LVWLYGVVFD RLPRARQIVN DMEDIVKFVA NRTASVREKA RVLYLWVDPL TVAGGASLFS QNIELAGGVN VAAADYPTMS TVKVDPERIL KWNPDVIIIA WQARYNESAV LNNPVYRGVN AVKNGRVYKK PILSEYTPDT ALSVLWTATK LYPDLFRDVN FTKVADYYYR RWYGVSYTQV WG
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