Gene Pisl_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0227 
Symbol 
ID4617012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp213983 
End bp216031 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content58% 
IMG OID639783308 
Productperiplasmic binding protein 
Protein accessionYP_929751 
Protein GI119871744 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0299459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.536447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA AAATAATTTC CCTATTGGTG GTAATACTGG CGGCTATTGC CGCAGTATAC 
CTCCTTTTGC CAAAGGGGCC GTCCCCCGCT CAGACGGCGC CTACGGCGGC TGTCTCGCCT
ACGGCTTCTC CCACGGCCGT CGCTACGCAA CCGCCTACTC AGACCCCGGC GGTCTCCCGG
CAGATCGTCG TCGTTGATTT CCGAGGTAAG AGGATTGTGC TTCCTAAGCC TCCCGAGAGG
ATCGTGGTGC TCAACTCCTA CTGGGCAGAG GTGTTAGTGG CGTTGGGGGC TGGGGATAAG
ATCGTCGGCA TCGGGAGATA CGTAGACGCC GACGAGTATC TGCCGCCGGA GGTGAGGAAG
AAGCCGGTGG TTGGGGATCT ATTCGGCGGT GTTAACGTGG AGGCGGTGGT GGCTCTCAAG
CCTGACGTGG TGGTGACAGA CTACGGCTAT GGAAAAGCAG ACGAGGTGAT AAAGAGACTT
GAGGAGGCGG GCGTCCCGGT GGTGGCGTTG TTTATGCGGG GGACTCCAGA CGAGTTGAAG
GCTGTGGAGG TATTGGGCAA CCTCACGGGG GCTGTGGATA AGGCGAGGGA GCTGAAGGCC
TTTATGGCCA AGAGGTTTGA AGAGCTGGGG GCCGGGGCGG CGAAGATAAA GGAGAGGAAG
AGGGCTGTGT TGATCTTCGG CAGTAGCATA CTGGCCGGCG GCCCGCTGTC TTTAGCCGCC
AACTCGTCCT TCGGCATGGC GTTGGTTGAG GCCGGCGCTG TAAACGTGGC GTTGGAGCAG
TTCCCAAACC AGGCCTGGCC TAAGATAGAC ATGGAGACGT TGATGAGGTG GGACCCCGAC
GTGGTTTTAA TAGCGGCATC GGCGGAAGAC GCCGGGAGGA TATTCGACAA GATCAGGTCA
GACGAGAGGT GGCGCGTCTT AAAGGCGTAT AAAAACGGCG AGATATACCT AGTCCCCTGG
GGGTCTAAGA TAGGGGATAT ACTCAACTGG GGGCCCCGGG GCGTAGTCGG CAGGGAGTAC
ATCGCGGAGG TGCTCTACCC CGACGTCTAC GCCTTTGACT GGCGGGGAGA TCTAAAGCGC
CTAGGAGATA TGTACGGCGT GTCTATCCCG CCGCAGGCCT ACGCCGTGTA CAACATAAAC
TGGAAGGAGG TGGTAGACCT GGCGGGGAAC GTGGTGAAGA TCCCCAGCAG GGTGGAGAGG
TTCGCCACCT TTGTCACATA TCAACTCCCC ATCGCCTTCA ACGTCACCTC TAGGCTCGTC
GCCGTGGGGA GAGACGCTGT CCAAGGCGTC TTCGCCCCTC TGATGAAGGC GGCTTTCCCC
GCCGTGGTAA ATCTGCCGAC GCCTGGAGAT CGCTTCAAGG TAAACGTCGA AGCTCTTGTC
CAGCTGAAGC CGCAGGTGGT GTTTAACTGG GTGGTAAACC CCGACGATAT AAGAACAATG
CAGAGGGCTA ACCTAACCCT GGTACAGGTG GTGGTTAACA ACTTCACAGA CGCCGAGAGG
CTCGTCTGGC TATACGGCGT GGTCTTCGAC AGATTGCCCA GGGCTAGACA GATCGTCAAC
GACATGGAGG ACATAGTGAA GTTTGTCGCC AACAGAACCG CGTCGGTGAG AGAAAAGGCG
AGGGTCCTAT ACCTCTGGGT AGACCCGCTG ACGGTGGCGG GAGGCGCCTC CCTCTTTAGC
CAAAACATAG AGCTGGCGGG CGGGGTAAAC GTAGCCGCGG CCGACTACCC CACCATGAGC
ACCGTGAAGG TGGACCCCGA GCGGATACTT AAGTGGAACC CAGACGTGAT AATCATCGCC
TGGCAGGCGA GATACAACGA GTCTGCCGTC TTGAACAACC CGGTATACCG CGGGGTAAAC
GCCGTGAAAA ACGGCAGAGT ATACAAAAAG CCCATCCTCT CGGAGTACAC GCCAGACACC
GCCCTCTCGG TGTTGTGGAC AGCCACAAAG CTCTACCCAG ACCTCTTCAG AGACGTAAAC
TTCACCAAGG TAGCCGACTA CTACTACAGG AGGTGGTACG GCGTGTCCTA CACACAGGTC
TGGGGGTAA
 
Protein sequence
MKWKIISLLV VILAAIAAVY LLLPKGPSPA QTAPTAAVSP TASPTAVATQ PPTQTPAVSR 
QIVVVDFRGK RIVLPKPPER IVVLNSYWAE VLVALGAGDK IVGIGRYVDA DEYLPPEVRK
KPVVGDLFGG VNVEAVVALK PDVVVTDYGY GKADEVIKRL EEAGVPVVAL FMRGTPDELK
AVEVLGNLTG AVDKARELKA FMAKRFEELG AGAAKIKERK RAVLIFGSSI LAGGPLSLAA
NSSFGMALVE AGAVNVALEQ FPNQAWPKID METLMRWDPD VVLIAASAED AGRIFDKIRS
DERWRVLKAY KNGEIYLVPW GSKIGDILNW GPRGVVGREY IAEVLYPDVY AFDWRGDLKR
LGDMYGVSIP PQAYAVYNIN WKEVVDLAGN VVKIPSRVER FATFVTYQLP IAFNVTSRLV
AVGRDAVQGV FAPLMKAAFP AVVNLPTPGD RFKVNVEALV QLKPQVVFNW VVNPDDIRTM
QRANLTLVQV VVNNFTDAER LVWLYGVVFD RLPRARQIVN DMEDIVKFVA NRTASVREKA
RVLYLWVDPL TVAGGASLFS QNIELAGGVN VAAADYPTMS TVKVDPERIL KWNPDVIIIA
WQARYNESAV LNNPVYRGVN AVKNGRVYKK PILSEYTPDT ALSVLWTATK LYPDLFRDVN
FTKVADYYYR RWYGVSYTQV WG