Gene Pisl_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0219 
Symbol 
ID4616992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp206792 
End bp207508 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content59% 
IMG OID639783301 
Productformylmethanofuran dehydrogenase, subunit E region 
Protein accessionYP_929744 
Protein GI119871737 
COG category[C] Energy production and conversion 
COG ID[COG2191] Formylmethanofuran dehydrogenase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.459295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTTC GAAAACAGAT AGTGGAGCTC CTCCAGAGGA GAGACCTCTG GGGGCTTTTA 
AACAAAGCGG CGGAGCTACA CGGCCACATA TGCGTAGGGC TGGCACTAGG CGTGAAGACA
AGCGCGGTGG CGCTGGAGAG GCTGGGCGTC TTGCCGGCCG ACGACACCGA CATAATCGCT
GTAACCGACA ACAACACCTG TTTCGCAGAT GGGGTCCAGG TGGTCATGGG CGCGACGCTG
GGCAACAACA GGCTGATCTA CAGAGACGCG GGCAGATTCG CCCTAATCCT CGTCGACAGA
AGAGGTGGAA AAGCCGTCAG GATCTCGCTC GCCGGCCGCC TCACCACTCC AACCATGGAG
AACCCCCGAT ACCGGGACTA CTGGAGCCGC CTACCCCAAC TCACGGAAGA GAAACGTCAA
GAGTTCCGAA GCCTAATGGA GAAGGCCTCG GCAGAGGTGC TGGAGGCTCC AGACGCCATA
TTCAAGATAG AGGAGGTGCC CCCAGACCCC ATCCTCGACG CCCTAAAAAG CACCACAAGG
CCGAGCTGGA CCGTCTGCGA GAGATGCGGC GTCGCAACCC TAGCAGAAAG GGCGGTCGTC
GTGGGGGGCC GCCACTACTG CCCAGACTGC GCAGGTCTAA AGACATATGC GGTCGTGGGG
AGAAAAATCA CCGAGTTTAA GCCCCCCTCC TCCTCGCCGA CTCAAACAGC TTTTTAA
 
Protein sequence
MRFRKQIVEL LQRRDLWGLL NKAAELHGHI CVGLALGVKT SAVALERLGV LPADDTDIIA 
VTDNNTCFAD GVQVVMGATL GNNRLIYRDA GRFALILVDR RGGKAVRISL AGRLTTPTME
NPRYRDYWSR LPQLTEEKRQ EFRSLMEKAS AEVLEAPDAI FKIEEVPPDP ILDALKSTTR
PSWTVCERCG VATLAERAVV VGGRHYCPDC AGLKTYAVVG RKITEFKPPS SSPTQTAF