Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0210 |
Symbol | |
ID | 4616658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 199077 |
End bp | 199748 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639783292 |
Product | ABC transporter related |
Protein accession | YP_929735 |
Protein GI | 119871728 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.786454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.319871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGCG AAGTGCTTAA GGCCGTCGAC GTCTACTTCG GCTATTCAGA GGACGTGCTG AAGGGAGTTA GCCTATCGGT TGGGGAGGGG CAGTTCATGG CGGTGATGGG GCCTACGGGC TCGGGCAAGA CCACCCTCCT CCTGGTGCTG GCGGGTCTCC TCAAGCCGCG GAGGGGGGAG GTGTACTTCA TGGGGGAGCC CCTGGAGGGG CAACTCCCAG CGGCTAGGAG GCTGATGGGG GTGGTGTTCC AGAACCCAGA CGACATGTTT TTCAACCACA CAGTGAGAGA CGAAATCGCC TACACAGCCG TGAGGATCTA CGGCAGAGAG GAGGGGCTTA AGCTCGCCGA GGAGGCGGCC AAGGCCCTTG GCATAGAGGG TCTCCTAGAT AGGCCCCCCT ACAAACTCAG CGGAGGGCAG AAGAGGCTTG TCACCCTGGC GGCTGCCACT GTCCACAGGC CTAGGCTACT CCTGTTGGAC GAGCCGACGA CTTATCTAGA CGAAGACGCG TATGAAGTTG TAGTTAACTA TCTTGCGAAA CTTAAAGCCG GCGGCGTCTC TGCAGTAATT GCCACACACG ACGAAGAACT TGCTGTCAGA CTTGCAGACT CTGTTTATAA ACTACGCGAG GGGAAGCTCA CTCCATATAC GCCGCGTAGA AAGCTATGTT AA
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Protein sequence | MRREVLKAVD VYFGYSEDVL KGVSLSVGEG QFMAVMGPTG SGKTTLLLVL AGLLKPRRGE VYFMGEPLEG QLPAARRLMG VVFQNPDDMF FNHTVRDEIA YTAVRIYGRE EGLKLAEEAA KALGIEGLLD RPPYKLSGGQ KRLVTLAAAT VHRPRLLLLD EPTTYLDEDA YEVVVNYLAK LKAGGVSAVI ATHDEELAVR LADSVYKLRE GKLTPYTPRR KLC
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