Gene Pisl_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0210 
Symbol 
ID4616658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp199077 
End bp199748 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID639783292 
ProductABC transporter related 
Protein accessionYP_929735 
Protein GI119871728 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.786454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.319871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCG AAGTGCTTAA GGCCGTCGAC GTCTACTTCG GCTATTCAGA GGACGTGCTG 
AAGGGAGTTA GCCTATCGGT TGGGGAGGGG CAGTTCATGG CGGTGATGGG GCCTACGGGC
TCGGGCAAGA CCACCCTCCT CCTGGTGCTG GCGGGTCTCC TCAAGCCGCG GAGGGGGGAG
GTGTACTTCA TGGGGGAGCC CCTGGAGGGG CAACTCCCAG CGGCTAGGAG GCTGATGGGG
GTGGTGTTCC AGAACCCAGA CGACATGTTT TTCAACCACA CAGTGAGAGA CGAAATCGCC
TACACAGCCG TGAGGATCTA CGGCAGAGAG GAGGGGCTTA AGCTCGCCGA GGAGGCGGCC
AAGGCCCTTG GCATAGAGGG TCTCCTAGAT AGGCCCCCCT ACAAACTCAG CGGAGGGCAG
AAGAGGCTTG TCACCCTGGC GGCTGCCACT GTCCACAGGC CTAGGCTACT CCTGTTGGAC
GAGCCGACGA CTTATCTAGA CGAAGACGCG TATGAAGTTG TAGTTAACTA TCTTGCGAAA
CTTAAAGCCG GCGGCGTCTC TGCAGTAATT GCCACACACG ACGAAGAACT TGCTGTCAGA
CTTGCAGACT CTGTTTATAA ACTACGCGAG GGGAAGCTCA CTCCATATAC GCCGCGTAGA
AAGCTATGTT AA
 
Protein sequence
MRREVLKAVD VYFGYSEDVL KGVSLSVGEG QFMAVMGPTG SGKTTLLLVL AGLLKPRRGE 
VYFMGEPLEG QLPAARRLMG VVFQNPDDMF FNHTVRDEIA YTAVRIYGRE EGLKLAEEAA
KALGIEGLLD RPPYKLSGGQ KRLVTLAAAT VHRPRLLLLD EPTTYLDEDA YEVVVNYLAK
LKAGGVSAVI ATHDEELAVR LADSVYKLRE GKLTPYTPRR KLC