Gene Pisl_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0180 
Symbol 
ID4617290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp174314 
End bp175555 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID639783262 
Producthypothetical protein 
Protein accessionYP_929705 
Protein GI119871698 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.825662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGCG TCTTTAGAGA GGTTATTGAA GAGTGGCTTA GCTGGAAGCC TCCTCCCATG 
GTAGAGAGGG AGCTGGAGGT ACCTCTGGAG ACCGGCTTGG CTACAGCCGT AATTGGGCCG
AGACGCGCGG GGAAGACGTA CCTCTTGTAT CAACTGGCAG TGAGACACGG AAGGTCGCTC
TATATTAACT TCGAGGATGT GAGATTTGTA GGCTTGAGAC CAAGGGACTT CAGTGTGTTT
TTAAAGACGT TGGCAGAGCA TGGGGACTTC AATTTATTGC TCTTAGACGA GGTACAGAAC
GTCCCTCACT GGGGGAGGTG GATTAGATCT CTGCTGGACA GAGGCTACCT GGTGGCTGTG
GCCGGCTCGA CGTCGAAACT AGGCGCTAGG GAGGTGCCGA CGGAACTGAG GGGGAGGTAT
CTATCCCGCC TCCTCCTGCC CTTCTCCTTC AGGGAGTATC TAAAGGCCGT GGGGATCCCG
GCGTTGGCGG GACACGCCCC GGCCTCCCGA GGCAGACTGC TGGGCGCGCT GAGGGAGTAC
CTGGAACGGG GTGGCTACCC CGAGGCCGTC CTAAGGCCTC AGCTGGCGCG GGAGCTCTTG
AGGACATACC GCGACACCGT GGTCTACCGC GACGTCGTGG AGAGACACAG GGTCAGAGAC
GCCAGGGGGT TCGAGGTCTT TCTCTCCATG GTGGAGTCCA GCTTCTGCAA CGTCTTCTCC
ATATCCTCAG CCCACAGGAG GCTGGCCTCC CTGGGGCTGG AGAAGAGCAA GAAGACACTG
GCCAACTACC TAAAGTACCT CGAGGAGGCC TTCTACGTGG TGGCCGTCCC TAAGTGGGGG
CCCGGCAAGA CGCCGCTGAC GCAACCCCAC AAGATCTACC CAGTGGATCC CGGCTACATA
CCCGAGGGGC AGATCGGCAG AAAGATGGAA GCGGCGGTGG CTGTGGAGCT CCTCCGGAGG
GGCGCGAAGT TCTACTACTA CAGGGGGAGG AGGGAGGTGG ACTTCGTGGT GGAGGGCGAG
CCGCCCCTCT TGATTCAGGT GACCTACGCC TCGGCGCCCG ACGAGGTCGA CAGAAGAGAG
CTTGACGCGC TCTCGGAGGC CGCGGCCGCC GTTGGGGGAA GGCCGCTGTT GATCACCTGG
GACCTAGAGG GCCAGATCGC GCGGAGCGGC CTTAGAGTCG ACGCGGTGCC GCTCTGGCAG
TGGCTGTTAG GCGGCTGGGC CAAGTCGCCG GCCTCTACCT AG
 
Protein sequence
MERVFREVIE EWLSWKPPPM VERELEVPLE TGLATAVIGP RRAGKTYLLY QLAVRHGRSL 
YINFEDVRFV GLRPRDFSVF LKTLAEHGDF NLLLLDEVQN VPHWGRWIRS LLDRGYLVAV
AGSTSKLGAR EVPTELRGRY LSRLLLPFSF REYLKAVGIP ALAGHAPASR GRLLGALREY
LERGGYPEAV LRPQLARELL RTYRDTVVYR DVVERHRVRD ARGFEVFLSM VESSFCNVFS
ISSAHRRLAS LGLEKSKKTL ANYLKYLEEA FYVVAVPKWG PGKTPLTQPH KIYPVDPGYI
PEGQIGRKME AAVAVELLRR GAKFYYYRGR REVDFVVEGE PPLLIQVTYA SAPDEVDRRE
LDALSEAAAA VGGRPLLITW DLEGQIARSG LRVDAVPLWQ WLLGGWAKSP AST