Gene Pisl_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0161 
Symbol 
ID4616779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp153100 
End bp153762 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content45% 
IMG OID639783243 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_929686 
Protein GI119871679 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC TAGTCCTCCT CTGGGATCGC TCAAGATGTG TAGCTTGTGG CGCTTGTGTT 
GCAGCATGTA ATGCAGCTAA TTATAATAGT AGCGGCGAAA TGAATAAAGT ATGGGGGTGG
CTTAAAAGCG ATATTAAAAT GGTCGAAGTT AAATCAGGGC CTAAACCAAC GTTATATCTT
GTCTATTGTC AACACTGCGA TAAGCCGTAT TGCGTTGCAA CATGTCCTAC AAATGCTCTG
TATAAAGATA GAGATGGCTT AGTAAAACTA CGGGAGAGCT CTTGTATAGG CTGTAGATAC
TGTTTAGCCG CTTGTCCATA TGGAGCGGTG TGGTGGGATG AGAAAAATAA CAAACCTGCG
AAGTGTATGG GGTCTGAATG TTTAAGAAGA GTATCAGAGG GGTTAAGACC TGTATGTGTA
GAGGTCTGTC CCTCCGGCGC GTTGGTATTT GGAGATATAG AGAGTCCCTC TAGTGAGGTA
TCACAGAAAT TTACTAAGGG AGAATACATT AAGCCGCCAG AAGACGAGGG GACAAAAGCC
GTTATAGAGA CGAGAAGTAC GTTAAAATCA TTAACTACAG CAGGAGGCGC TGCGCTTGCT
GGCGTTCTTG CTGTTTTGGG TTTTGTTGCT TGGCGTCGGG CGAGGGTAGA AGAGAAAAAA
TAA
 
Protein sequence
MTRLVLLWDR SRCVACGACV AACNAANYNS SGEMNKVWGW LKSDIKMVEV KSGPKPTLYL 
VYCQHCDKPY CVATCPTNAL YKDRDGLVKL RESSCIGCRY CLAACPYGAV WWDEKNNKPA
KCMGSECLRR VSEGLRPVCV EVCPSGALVF GDIESPSSEV SQKFTKGEYI KPPEDEGTKA
VIETRSTLKS LTTAGGAALA GVLAVLGFVA WRRARVEEKK