Gene Pisl_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0153 
Symbol 
ID4616616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp147206 
End bp148096 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content47% 
IMG OID639783236 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_929679 
Protein GI119871672 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG TTAGAGTTCT AGAGGGCGTT TATAAGATAG ATCTAGAGCC CGGGGGGTTT 
TCCAATCTCG TGTCTGTATA TGTGGTAGAC GCCGGGAGAA ATCTCGCCGT TTTTGAGGGA
GGGCCTGCGT GTTCAAAAGC AGATCTAGTA ACTGCTGTTA AAACTCTTGG AAAACCTCCT
TCACATATAT TTCTTACACA TGTACATATA GACCACTACG GAGGCTCGGG GGCCTTGGCT
GAGTTAAATC CAGAGGCCTT ATTCTACGTA CACCCTAGAG GCGCTAAGGT GCTTCCCAAC
CCAGATATAA TATGGGTGCC TGCGAGAGAG GCCATGGGAT GGCTCGGCGA GTTGTATGGA
AGGCCTCTCG AAGTGCCTAG TAGAAACGCC AAAATTACAG AAGACGGTGA GATTGTAAAC
ATAGGCGACA TAGAGGTTGA GGTTGTCCAC ACCCCTGGAC ATGCGAGCCA CCACCAGTCT
TTTATCATAA AGCCGTGGGA TATACTTGTG GTGGGAGATG CCGCCGGCAT ATACGTAAAG
TCGCTTGACT ACATTATTCC AACTACAATG GAGCCGCTTA GACTCGACAT GTATATAGAA
AGCGTCAAGA AGCTGATTTC AAAAAGGCCT AGATACGTCG CATATACCCA CCACGATCTT
TTAGACAACG CCGTCGACCT CTTAAATAGA CATCTATCTC AACTAGAGAC ATGGAGTAGA
TCTGCGGAAG AAGCCGCCAG AGAAAAACTC ACGCCTGCAG AGCTAGAGTC TATCTTAGCT
GAGAGAGATC AAGACCTCCG CCGCGTCTAC CCAGAGTTAA AAAAACTAAA GGCGCATTAC
CACCTCTTCC AAATGGCAGT ACAGGGAATT TTAAAATACT ACAGCTCATA A
 
Protein sequence
MKIVRVLEGV YKIDLEPGGF SNLVSVYVVD AGRNLAVFEG GPACSKADLV TAVKTLGKPP 
SHIFLTHVHI DHYGGSGALA ELNPEALFYV HPRGAKVLPN PDIIWVPARE AMGWLGELYG
RPLEVPSRNA KITEDGEIVN IGDIEVEVVH TPGHASHHQS FIIKPWDILV VGDAAGIYVK
SLDYIIPTTM EPLRLDMYIE SVKKLISKRP RYVAYTHHDL LDNAVDLLNR HLSQLETWSR
SAEEAAREKL TPAELESILA ERDQDLRRVY PELKKLKAHY HLFQMAVQGI LKYYSS