Gene Pisl_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0122 
Symbol 
ID4616316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp114366 
End bp115172 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content50% 
IMG OID639783204 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_929648 
Protein GI119871641 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0617777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCT TGACGGCGAT TGTATTGGGG GTAGTTCAGG GAGTGTCCGA GTGGTTGCCC 
ATAAGTAGCA AGACGCAGGT TATGTTTGTC TCACAACTAC TACTGAGCGC AACGCCTGAG
CTCGCCTATT CGCTGGGACT CTTTCTCGAG GCCGCGTCGG TATTAGCCGC ATTGATATAT
TTCAGACTGG TGTATCTAAA AATTTTGAGG GGGTTTCTTG GAGACGCCGA GGGAAGAAAA
TGGCTGACTT ACGTAATAGT AACCACCGCC GCAACAGGCG CCGTGGGAAT ACCGCTTTAT
ATGGCGGCAA AACGCTACCT ACTCTTAGGC GCAAGCGCCG GCTGGCTTAT GGTTGTACTT
GGCGTCGCAG TCATATTTAA CGCAGTACTT CTTCAGAGAG CCCGCTCGGT GGCGGGGCTT
AAAACCTTTG ACGACATGAC TCTTGGCCAC ATGGCGTTGG TAGGCCTAGC CCAAGCCCTA
TCGGTGTTGC CTGGCATAAG CCGCTCTGGC ATAACCACAA CAACATTGTT ACTACTCGGC
TACCGGCCAG ACGAAGCTTT TAAATCTTCT TTCGTCTTAG TGCCAATTGC AGGACTCGGC
GCCACAGCCT TGGCCTACCT CTCAGAAGGG GGCGCAGTGG CCACTCCCGA AGTTATTACA
GCTATGTTGA TAGGGCTTGT AGTTAGTCTT GTAACTATAA AGGCTCTGCT AGAATTTGCA
AAAAGTAAAC ATGTCACACT TGTGAATATA GTAGTAGGCA CTTTGGCAAT AGCCGGAGGA
ATTACGAGAA TTCTACTTAG TTCTTAA
 
Protein sequence
MDFLTAIVLG VVQGVSEWLP ISSKTQVMFV SQLLLSATPE LAYSLGLFLE AASVLAALIY 
FRLVYLKILR GFLGDAEGRK WLTYVIVTTA ATGAVGIPLY MAAKRYLLLG ASAGWLMVVL
GVAVIFNAVL LQRARSVAGL KTFDDMTLGH MALVGLAQAL SVLPGISRSG ITTTTLLLLG
YRPDEAFKSS FVLVPIAGLG ATALAYLSEG GAVATPEVIT AMLIGLVVSL VTIKALLEFA
KSKHVTLVNI VVGTLAIAGG ITRILLSS