Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0116 |
Symbol | |
ID | 4617563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 109995 |
End bp | 110642 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639783198 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_929642 |
Protein GI | 119871635 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.478002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGCG GCACGGAGAT TGTTGTAGTT AGAATTAAAG AGGGACGTTG CCCCAGCGGC GCATACTGTA TATCTATAGG TAGGATAATT CCACGCCCTG ATGTTGTTAT TCCAGACGGC GACTACTTAG TCATCATGAG CCCCTCTGTG GCTTATTCGA TAAATTTAAG CAACGTTGTA AAGAAGTTCA AATGTGTTAT ATGTGTAGGC CCTTCTACAG CAGAGGCCGT CGGCAACTGT ATAGTGCCAA GAGAGTATAC GAGCTATGGC GTAGCGCGGT TATTGAAGGA GCTCGCCCCT GGCAGAGTCG TCGTCTTGAG GTCAAGCGCT GGCAACGAGG TGTTAAAGAC GTTGGTGCCA AATGTGATAG AAGTTCCTGT CTACGACATT GTATTAGATA GAGACAGGAT AGAGGAGGCG GCAAAAGCCA TAGTCATGGC AAAAGCTGTG GTATTTACAA GCTCAACCGC CGTAGAGGCG GTAGCTAAAG CTGTAGACCT CACAGGAAAG ACCGTAGTTG CAATCGGCGC CGTGACGTCA CAAAAATTGA CGCAACTGGG AATACCACAT ATAACGGCGG GTGAAGCTAC AATAGAGGAG GCTGTAAAAA CGGCGAAAAA AGAGTTAGAA TTATTTAAGC CCAAGTAG
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Protein sequence | MGGGTEIVVV RIKEGRCPSG AYCISIGRII PRPDVVIPDG DYLVIMSPSV AYSINLSNVV KKFKCVICVG PSTAEAVGNC IVPREYTSYG VARLLKELAP GRVVVLRSSA GNEVLKTLVP NVIEVPVYDI VLDRDRIEEA AKAIVMAKAV VFTSSTAVEA VAKAVDLTGK TVVAIGAVTS QKLTQLGIPH ITAGEATIEE AVKTAKKELE LFKPK
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