Gene Pisl_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0116 
Symbol 
ID4617563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp109995 
End bp110642 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID639783198 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_929642 
Protein GI119871635 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.478002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGCG GCACGGAGAT TGTTGTAGTT AGAATTAAAG AGGGACGTTG CCCCAGCGGC 
GCATACTGTA TATCTATAGG TAGGATAATT CCACGCCCTG ATGTTGTTAT TCCAGACGGC
GACTACTTAG TCATCATGAG CCCCTCTGTG GCTTATTCGA TAAATTTAAG CAACGTTGTA
AAGAAGTTCA AATGTGTTAT ATGTGTAGGC CCTTCTACAG CAGAGGCCGT CGGCAACTGT
ATAGTGCCAA GAGAGTATAC GAGCTATGGC GTAGCGCGGT TATTGAAGGA GCTCGCCCCT
GGCAGAGTCG TCGTCTTGAG GTCAAGCGCT GGCAACGAGG TGTTAAAGAC GTTGGTGCCA
AATGTGATAG AAGTTCCTGT CTACGACATT GTATTAGATA GAGACAGGAT AGAGGAGGCG
GCAAAAGCCA TAGTCATGGC AAAAGCTGTG GTATTTACAA GCTCAACCGC CGTAGAGGCG
GTAGCTAAAG CTGTAGACCT CACAGGAAAG ACCGTAGTTG CAATCGGCGC CGTGACGTCA
CAAAAATTGA CGCAACTGGG AATACCACAT ATAACGGCGG GTGAAGCTAC AATAGAGGAG
GCTGTAAAAA CGGCGAAAAA AGAGTTAGAA TTATTTAAGC CCAAGTAG
 
Protein sequence
MGGGTEIVVV RIKEGRCPSG AYCISIGRII PRPDVVIPDG DYLVIMSPSV AYSINLSNVV 
KKFKCVICVG PSTAEAVGNC IVPREYTSYG VARLLKELAP GRVVVLRSSA GNEVLKTLVP
NVIEVPVYDI VLDRDRIEEA AKAIVMAKAV VFTSSTAVEA VAKAVDLTGK TVVAIGAVTS
QKLTQLGIPH ITAGEATIEE AVKTAKKELE LFKPK