Gene Pisl_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0106 
Symbol 
ID4616940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp100844 
End bp102280 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content51% 
IMG OID639783188 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_929632 
Protein GI119871625 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0907034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAG TGTTAGTCGT AGGCGACGGC GCGCGAGAAC ACGCCATTGC CTGGTCATTA 
GAAAAGTCGG GGGTTGCCGT TGGCGCCGTG ATTTCACATC TAAACCCCGG GCTTGTAGAC
ATTATAAAAC GTACCGGGGG GAGGGTCTTC TTAGGAAGCC CCGTGGACCC CCATTTTGTG
GTTAAGGCCG CTGAGGAGTT CTCTCCTGAC TTAGTTATCA TAGGCCCAGA AGAGCCGCTT
TTTGCAGGGG TGTCTGATGC CCTACGTGAA AAAGGGTTTA GAACTTTAGG CGCCTCTAAG
AGACTTGCGA TTATTGAAAT GCGGAAAGAC GTCGCCAGAG CTCTACAGTG GAAGTATGGA
ATACCCGGGA GGTTGATATA CGGCGTATTT AAAAACATAG AGGAGGCGTA TAGCTTTAGT
AAAGCTCTTG GCGCTGTGGC GATAAAGCCC ATTAGACAAG CCGGTGGCAA GGGGGTGAGA
GTGATCTATG GAGATGCCAA ATATCTGGAA TTTGACGAAG CGTATAGAAA AAGCGCTGAA
GACATAATGA AACAACTTTC TAATTTTAGG GATGTTGACG CCGCAGTGCT TGTAGAAGAG
GCTGTATGGG GTATCGAGTT TACAATACAA GCGTTAACAG ACGGCGAGAC GCTATTCTTC
TTCCCGCCTG TACAAGACAA TCCACATGCA TATGAATATG GCGTAGGGCC TGAATGCGGC
GGCATGGGGA CAATCTCGCC ATTGCCATTC TTGGAGGAGG GAGAGGTAGA AGAAGCTAAG
AAGGCTGTAG AGTTCACTGT AAAAGCCTTG CGTGAGGAAT TCGGCGAGAG ATATGTGGGC
GTAATCAGTG GACAAATGAT GTTGACAACG CGCGGCCCCG TCATAATTGA GTACTACAGC
AGGCTGGGAG ACCCAGAGGC ACTTAACGCC CTCTATCTCT ACGAGGGAGA CGCCTACTCT
CTGTTTAGTC TTGCCGCCGA TGGTAAACTT CACAAAGCGG AGAGGAGGTT TAAGGAGGAA
TACACAGTGG TTAAAGCTCT TGCCCCCCTG GGCTATCCGC ATAAAAGAGA TATAGCCAAG
GGGAGGAGGG TATATATCGA TTGGGACGTG ATCAAGAGAG AGGGGTGTCT CGTCTTCTTC
TCGTCCGTTG AAGAGAGAGA CGGCGCCTAT GTCACACTTG GCTCTAGGGC ACTTGAAATC
CTCGCCCCGG GGAAGACGGC AGAAGAGGCT TATCTTAAGT CGGAGAGGTG TATGTCTGCG
GTGAGGGGAG ACGGCGTCTA CTACCGCCGC GACATTGGCT CGCCTGAGTA TATGTCCTAC
ATGGCAACTA AGGCGGGCAA AGTAAGAGCT GTCTACAAGT GGAGAAGAGA GAGAGGCTTA
GACGGCAAAA TTGCGATATG GGAGCCGGGG GTGGGGCTGA GAGAGTATAA GCTATGA
 
Protein sequence
MDKVLVVGDG AREHAIAWSL EKSGVAVGAV ISHLNPGLVD IIKRTGGRVF LGSPVDPHFV 
VKAAEEFSPD LVIIGPEEPL FAGVSDALRE KGFRTLGASK RLAIIEMRKD VARALQWKYG
IPGRLIYGVF KNIEEAYSFS KALGAVAIKP IRQAGGKGVR VIYGDAKYLE FDEAYRKSAE
DIMKQLSNFR DVDAAVLVEE AVWGIEFTIQ ALTDGETLFF FPPVQDNPHA YEYGVGPECG
GMGTISPLPF LEEGEVEEAK KAVEFTVKAL REEFGERYVG VISGQMMLTT RGPVIIEYYS
RLGDPEALNA LYLYEGDAYS LFSLAADGKL HKAERRFKEE YTVVKALAPL GYPHKRDIAK
GRRVYIDWDV IKREGCLVFF SSVEERDGAY VTLGSRALEI LAPGKTAEEA YLKSERCMSA
VRGDGVYYRR DIGSPEYMSY MATKAGKVRA VYKWRRERGL DGKIAIWEPG VGLREYKL