Gene Pisl_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0101 
Symbol 
ID4616954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp94853 
End bp96934 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content52% 
IMG OID639783183 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_929627 
Protein GI119871620 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00123844 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTAA CACAACGCGA GCTTGAGATA ATACGTGAGA GACTGGGGAG AGAGCCCACA 
GCCGCCGAGT TGGCCTTTTT CACGTCACAT TGGTCTGAGC ACTGCTCCTA CAAATCCACT
AAGATGTGGC TCAGAGAGCT CCCCGGCTCT GCGCCGTGGG TTGTTAGAGG AAGGGGCACA
GACGCCCCGC TTGTAGAGGT GGCGCACGGT CTCTACGTCA GCTTTAAGAT AGAATCACAT
AACCACCCTA GCGCCGTCGA CCCCTACAAC GGGGCAGCTA CCGGCGTCGG TGGGATAATA
CGAGATATCC TAACCGTTGG AGCGACACCG ATAGCTCTTC TCGTTAATCT ACACTTCGGC
CCTCCCGAGG ACCCCCACGC CAAGTGGATA TTTTCTAACG TGATTAAGGG TATCTCTGAC
TATGGCAACC GAGTCGGGGT CCCCGTGGTG GGCGGCGAGA CGTGGTTTGA CGAAGATTTT
ACATACACTC CCATAGTCCT CGCCACTTGC GTCGGGGTGG TTGAGGCAGA GGCTGTGCCG
AAGGGTTACG TAGAGCCTGG GGATTACATC GTGGTGGCGG GCCTTGGGGC AGACAGAAGC
GGGCTAGGCG GCTCGGCCTT CGCCAGCAAG ACCTTGGAGG GGGGCGAGGA CCTCGGCGCA
ATACAAGTGG CAGACCCCCT AATGGGAAAA AAGCTAATCG ACGTAGTGAA AGAAGTTAGT
AGATGTGTAA AGTTCATAAA AGACCTGGGA GGCGGGGGCT TGGCCACAGC TCTCGCCGAG
CTTTCCCACT GGTTTTCCCT AGGGGTGGAG TTCCACTTAG ACAAGCTACA TGTACGAGAT
GCATCGGCCT TGCCCGAGGA GTTGCTCATA AGCGAGACAC AAGAACGTCT GATTTTCGTC
ATTTCTCCAC GAGATTTGCC ATGTCTAGAG GAGGCGCTGA GAAAATACGA GGTTCCATAC
TCTATCCCAG GGCGTTTTGT AAAAAGCGAT AGAGTATTGG TAATGTGGAA GGGCGTTAAG
ATAGTCGACA TACCTATTTC TCTAGCAGAT GGAGCGCCGG AAATCCTCTG GCCTCAAGAG
CCTTACCAAC CATCCGATAT TCCCGAAATC CCCGAGCCGC CTATAGACAA AGCGATAGAT
ATTGTCTTGT CCTCCCCCAA TGTAGCTAAG AAAGAGTCTA TATACATGCG CTTTGATTTC
GATGTAGGAG TTAGGACGGC AGTAAAGCCG GGGGAGGGAG ACGCCGCAGT GTTAAAACTC
TATCAACGTG GGCAACTGGG CCTTGTAGTA AAGGGAGACG CCAATCCGAG GTACACCTTC
TTAGATCCGA GACTGGGGGC CGCCAACGCC TTTGTAAAAG CCTATAGAAA CGTCGCCGTT
GTGGGCGGAG TTCCCCTCGC CGCCGTAGAC TCTATAAACG TGGGGAGTCC CGAGAGGCCG
CAAGTCTACT GGCGGTTTGT ACAAGCTGTA CAAGGCCTAA AGGAAGCCGC AACTGAACTT
GAGGTGCCTA TTGTAGGGGG TAAAGTCAGC CTATACAACG AATACATGGG CCGTCCCATA
AAGCCGACAG TTGCCGTGGT CGTGCTTGGC AAAATCGACG ACGTGTCTAA GGCAAATAGA
GCGCTTTGGC ACGACGGCGA CAAAATATAC ATCTGGGGCG TTACAAAAGG TGAAGTAGGG
GGGAGCGAGT ATTTAAAAAG AGTACATGGG ATACTTGCTG GGAGGCCTCC TAGTATAGAT
TATGCGGCTG AAAAAGAAAT TGTAGCGGTT ATACAGAGCT GGCTTGGGAA AATAAGTGGC
GCTACTGACG TAGGACTCGG CGGGTTAATT ACGGCGTTGG CAAAAATGGC TATAAACAGC
GGCATAGGCG GCGAAATAGA TGTATGTAAA GCCCCGGCAG AGACTACAAG ACTAGACTAT
CTATTATTTA GCGAGTCGAA TGGCCGTTTT ATAGCAACGG GAGCAGAGGG GCCTGGCGTT
GCAATTGGCG AGGCATATGG CGAAGAGTTT GTGGTTAAAT GTGGCGGGAC GTTGATATAT
AAGCGGGGGG TGGAAGAGCT TAAACGTCTA ATGTCTCTTT GA
 
Protein sequence
MGLTQRELEI IRERLGREPT AAELAFFTSH WSEHCSYKST KMWLRELPGS APWVVRGRGT 
DAPLVEVAHG LYVSFKIESH NHPSAVDPYN GAATGVGGII RDILTVGATP IALLVNLHFG
PPEDPHAKWI FSNVIKGISD YGNRVGVPVV GGETWFDEDF TYTPIVLATC VGVVEAEAVP
KGYVEPGDYI VVAGLGADRS GLGGSAFASK TLEGGEDLGA IQVADPLMGK KLIDVVKEVS
RCVKFIKDLG GGGLATALAE LSHWFSLGVE FHLDKLHVRD ASALPEELLI SETQERLIFV
ISPRDLPCLE EALRKYEVPY SIPGRFVKSD RVLVMWKGVK IVDIPISLAD GAPEILWPQE
PYQPSDIPEI PEPPIDKAID IVLSSPNVAK KESIYMRFDF DVGVRTAVKP GEGDAAVLKL
YQRGQLGLVV KGDANPRYTF LDPRLGAANA FVKAYRNVAV VGGVPLAAVD SINVGSPERP
QVYWRFVQAV QGLKEAATEL EVPIVGGKVS LYNEYMGRPI KPTVAVVVLG KIDDVSKANR
ALWHDGDKIY IWGVTKGEVG GSEYLKRVHG ILAGRPPSID YAAEKEIVAV IQSWLGKISG
ATDVGLGGLI TALAKMAINS GIGGEIDVCK APAETTRLDY LLFSESNGRF IATGAEGPGV
AIGEAYGEEF VVKCGGTLIY KRGVEELKRL MSL