| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0089 |
|---|
| Symbol | |
|---|
| ID | 4616989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 83512 |
|---|
| End bp | 84225 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639783170 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_929615 |
|---|
| Protein GI | 119871608 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.842138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCTGCA TCAGGGCTGA GGGGCTTGTC AAGAGGTTCG GCTCAGTTGC GGCCCTTAGC
GGAGTGAGCT TCGAGGTGGG GTGCGGTGAG TCAGTGGCCC TCCTCGGCCC CAACGGCGCT
GGCAAGTCCA CGACTCTCAG AATCCTCGCC GGTCTCTTGA AGCCAGACGC AGGGAGGGCG
GCCGTCTGTG GCTATGATGT ACAGGCGAGG CCTAGGGAGG CCAAGGCGTG CCTCGGCTTT
CTGCCCGAGG ATGCCGTGCC CTTCCTAAAC CTAACTGTCA GAGAGAACCT CCAGTACATG
GCGGTGCTCC GGGGCCTCCC CGACTCGGCG GTGGACGAGG CGCTTAAGCT CCTCGGCATA
GAGGAGCTGG CAGACCGGAC CGCCGCCTCG CTCTCAAGGG GCAATAGGCA GAGGCTGGCC
ATCGCGCTGG CAGTGATGCA CAAGCCGAGG GTCCTCCTCC TCGACGAGCC ACTGAACTAC
CTCGACATCC CGGCGCAACA AGACTCCGTC AAGCTCTTCC AGTCGTTGAA GTCGTCGGGG
TCGGCCATAT TCGTCTCGAC GCATATAATG TCGGTGGCCG AGAGGCTCGC GGACAAAGCC
CTAGTAATAA ACAGGGGGAG GATAGTCTGG CAGGGGCCAA TGGACGAGCT TAGGGAGAAG
GCGGCCGACG CGGGCGAGAG GATAGAGGAC GTGGTGGCCC GCCTGATGAG ATGA
|
|---|
| Protein sequence | MGCIRAEGLV KRFGSVAALS GVSFEVGCGE SVALLGPNGA GKSTTLRILA GLLKPDAGRA
AVCGYDVQAR PREAKACLGF LPEDAVPFLN LTVRENLQYM AVLRGLPDSA VDEALKLLGI
EELADRTAAS LSRGNRQRLA IALAVMHKPR VLLLDEPLNY LDIPAQQDSV KLFQSLKSSG
SAIFVSTHIM SVAERLADKA LVINRGRIVW QGPMDELREK AADAGERIED VVARLMR
|
|---|
| |