Gene Pisl_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0081 
Symbol 
ID4617028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp77839 
End bp79830 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content63% 
IMG OID639783163 
Producthypothetical protein 
Protein accessionYP_929608 
Protein GI119871601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAGGG CGGTTCTGGT CCTGCTGGCG GGCGTCTTCC TAGCCCTAGG CCAGGCGGTG 
GCTTTTCAAC CCGCCATGGA GCGGCTTTTT CTCGGGGGCC AGTGGGTAGA CGTGCCGAAA
TACCCCGGCG ACGTCGGTCT GCTCAAGCTG TCTTACTACC TCGCCGACCA GCACGTAGAC
GTTTCTATCT CGCTCTCTAG GTGCGGCCTC AAGGCAGAGC CCTATAGGGC GGCCTCGGCC
GGCCCCGGCG TGTTTGAGGC CGTGCTGAAA GTAAGAGCCG ACAGGCTGGG GCAGAGGGAA
GGTTGCACCG TGGTTTTTAA GTCGAGGTAT AGGTACAAGT CTGGGGTTTT AACAGACGGC
GTAGAGTGGG TAGACTATCT AGAGGTGGAG GTGCCCAACT ACCCGTCTCC CAAGGCGGAG
GCCGTGGGCT CTCTATATCT GGGGGCCAGG GGGAGGATTC TGCTTAGGGT TTGGGACAGC
TACCGCTACC TGGGGGTTGT GGAGGTTTCG GCAGTTGGCG CAAGGCTCTA CAGCCCCGCG
GTGTATTATG GCGACATCGG CAATCTCACG GCGTATTTAG ACGTAGCGCC GCTGGACTAC
TCGGCATCGC TTGTGGTCAC GGTCAAGGCT AGGGACGCCC TGGGGAGGGA GGTCGCCGTC
TCTAGGCAAG TGCCTCTTTC TGTACAGCCG AGGCCCGCCC CTAGGCTAGA GGCTTACCCC
CCGTGGCTTC CGGCCGGGGG GTGCGGGAGG GTGCGCATCT CGGTGTCCTA CCCCATTCCC
CTCAACGGCA CGGTGTATGT GCCTGACGGG TCCGCGCCGC TGGCCGGGGG ACACGGCGTG
GTGTACACTA CTGTCTGCGC CGCAGGAGGT CACGCCACTG TCCCCGTGAC CGTCCAGCTG
GACACGGGGG CAGTGGACAG AGCAGAGCTA CAGTTGCCCG TGTACCCAAT TTCGCCGTTT
CCCCTCAACG TCACCGCGCA ACCAGGCGTT TTGACGGCGG GGGACGTCAA CAAGGTGTCT
ATCTACGTCA CAGCTCCCGG GCCCTACGTG GGGGAGCTGT CTGTCGCCGG GGCGGCCTCT
CTCACGGGGA CGCCTGTCAG ATTTTCGGGC AACGGCACGA CGAGAGTCGA CCTTTTGCTC
ATCCCCACCT CCGGCGTCGT TACCATCGAC GTGGCCGTGT CTGCTGGGGG CTACACTGCG
AGAAGCTCAG TGGCGCTTGT GGCGTCGCAG AAGGCGCCTC TAGAGGTGTA TGTTGAGCCG
CGGGAGGTGG CGGCCGGCGG TAGTCATGTG GTGAAGGTGA CAGTGACGCC TAGGGTAAAC
ATATCTCATC TCGTGATCAC CCTCTACCCA GTGTCTGGGG CGGTGTTTCC ACAGACCACG
TTCCGCCTCG GAGCCCGGGG AGGGGCCGTG GAGCTCCCCA TACAAATCCC CGCAGATGTG
GTGGGGAACG TGGCCATTGG CTACAGAGCC GCCTACACCC TGGCCTCGGG GGTTTCTGGC
GAATACAGCG GGACTCTCTA CCTAGTGGCG CTCCAGAGAC CGCAGCTCTA CATACAGACC
TCGGTGGTGC CGGAGACGCC TACGGCGGGG GAGCCGTTCT ACCTGGCGGT TAGGCTCTTC
AACGCAGGGG GAGTCGATGC GAGAGACGTC GTTGTAAATG TAACAGGCGC AAGAGTTGTA
AAAGCTCCGC CCCCGCTGGG GGCAATACAG CCGCAGGGGA GTAAAGACGC AGTCTTCACC
CTAGTAGCCG ACGGGGCGGG GCTGCGCAAT ATCACCATCA CGGCTATTTA CAAAGACGTC
TTGGGGAGGT CCTACGCGGC GCGAAGCGCC GTAGCTCTCT ACGTCAACGC CAGCGCGCCG
TCTGCCGCCA CACCACTTCA GCAGAGCGGC GGGTCGGAAC AGACGTGGCT CGTCTTGGCC
GCGTTCACAG CATTGGGAGC CGCGGTGGTG GCCGTCGGCT TGTGGAGGGG GCGTGTTGCC
AGACCTCGCT AG
 
Protein sequence
MPRAVLVLLA GVFLALGQAV AFQPAMERLF LGGQWVDVPK YPGDVGLLKL SYYLADQHVD 
VSISLSRCGL KAEPYRAASA GPGVFEAVLK VRADRLGQRE GCTVVFKSRY RYKSGVLTDG
VEWVDYLEVE VPNYPSPKAE AVGSLYLGAR GRILLRVWDS YRYLGVVEVS AVGARLYSPA
VYYGDIGNLT AYLDVAPLDY SASLVVTVKA RDALGREVAV SRQVPLSVQP RPAPRLEAYP
PWLPAGGCGR VRISVSYPIP LNGTVYVPDG SAPLAGGHGV VYTTVCAAGG HATVPVTVQL
DTGAVDRAEL QLPVYPISPF PLNVTAQPGV LTAGDVNKVS IYVTAPGPYV GELSVAGAAS
LTGTPVRFSG NGTTRVDLLL IPTSGVVTID VAVSAGGYTA RSSVALVASQ KAPLEVYVEP
REVAAGGSHV VKVTVTPRVN ISHLVITLYP VSGAVFPQTT FRLGARGGAV ELPIQIPADV
VGNVAIGYRA AYTLASGVSG EYSGTLYLVA LQRPQLYIQT SVVPETPTAG EPFYLAVRLF
NAGGVDARDV VVNVTGARVV KAPPPLGAIQ PQGSKDAVFT LVADGAGLRN ITITAIYKDV
LGRSYAARSA VALYVNASAP SAATPLQQSG GSEQTWLVLA AFTALGAAVV AVGLWRGRVA
RPR