Gene Pisl_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0080 
Symbol 
ID4617029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp76737 
End bp77858 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content62% 
IMG OID639783162 
Producthypothetical protein 
Protein accessionYP_929607 
Protein GI119871600 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCCAG ACCTCGCTAG GCTGGCTTGG CAGTCTGTCA GAGAGAGGGC GGGGAGGTCG 
GCACTTGCGG CTATGGGCGT CTTCGTGGCC TTTCTGGCGC TGGCCGTGGC GCTGTCTGTG
GGGGAGATGG CGAAGTCGGC TGTGGAGTCG GCCTTCCAGC AGCTGGGCCT AAACACGGTG
TGGGTTATGG CCCAGAGGGG TTATTTCACG GAGGCAGACG CGGCCACAGC TACGGCTGTG
GCGAAGGAGG GGGTGGTGAT ACCCATAGCA CAGGACTTTG GAAGACTCAG GCTGCCAGAC
GGGACGGAGC GTGCCGTGAC GGTGTACTAC ATTCCGCCTC AGTACCTAGG GCTCCTCCTG
CCTAAGGAGG CTTTGAGAAG CGGCCAGCTC TACGTCGGAG GGCCCTTGGT GATGGTAAAC
AGCCGCGTTC GTACGGCCGG CGATATGCCG GTAGCGCCCG GGTCCCCCAT GACGTTGACG
AGAAGCGACG GAAGTGTCGT CGAGGTGGTG GCGGCGGGCG TCTTCGAGTC GACGGGCTTT
ATCGGGGCCG CAGACGTGTT GGCAGACAAC GCCCTGTACC CAGAGAGGAG GTATATAATC
CTCTACATAG TGGCCAGGAG CCCCCAGGCC GCCGAGGCGC TGGCCCAGGC GCTGAGGCCC
TACTTCCCAG ACGCCGTGGT GATTACGCCT CAAACTCTGG CTAGGCAAAT CGGCCGGCTG
GCCTCTGTTG CACAAATCGG CCTTGGGGCG CTGGCGGGCA TCAGCTCGTT GGTCACCGCG
ATGTGGCTCT ACGACACTGT GACAATATCT ATCCTCCAGA GGACTAAAGA GATAGGCATC
ATGCGTGCAG TGGGGTTCAA GAGGAGACAC GTCATGGCTA TGCTACTGCT GGAGACCTTC
ATAGTGGTGG GGGCGGGCGT ACTTGCGGCG CTTCCCATAT TGGCCGCGGC CTCAGCTATC
CCAATATCGC TAGGCCCCGG CGTATACCTC AAGTTGGCCA TCTCGCCTAT TGCGGTGGGG
GCGGCTGCCG CCGTGGTGAT CGGCGCCAAT ATCCTCGGCG TACTCGTCCC CGCTTATAGA
GCCAGTAGAC TCAATATTGT CGACGCTCTG CGCTATGAAT AG
 
Protein sequence
MLPDLARLAW QSVRERAGRS ALAAMGVFVA FLALAVALSV GEMAKSAVES AFQQLGLNTV 
WVMAQRGYFT EADAATATAV AKEGVVIPIA QDFGRLRLPD GTERAVTVYY IPPQYLGLLL
PKEALRSGQL YVGGPLVMVN SRVRTAGDMP VAPGSPMTLT RSDGSVVEVV AAGVFESTGF
IGAADVLADN ALYPERRYII LYIVARSPQA AEALAQALRP YFPDAVVITP QTLARQIGRL
ASVAQIGLGA LAGISSLVTA MWLYDTVTIS ILQRTKEIGI MRAVGFKRRH VMAMLLLETF
IVVGAGVLAA LPILAAASAI PISLGPGVYL KLAISPIAVG AAAAVVIGAN ILGVLVPAYR
ASRLNIVDAL RYE