| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0074 |
|---|
| Symbol | |
|---|
| ID | 4617212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 69124 |
|---|
| End bp | 70401 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639783156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_929601 |
|---|
| Protein GI | 119871594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.861381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCA AACTCGTGGT GGTGCTCCTG GCGGCGGCCC TCGCCGCCGC CCAACAACTC
TATGTGCCAG TATTAGTAGA TGTAGCACAT GGCGAAGCCA CAAAAGGGCT GGATTTCTGG
GTCAACTCCA CGGCTAACCC CCTGGCGATT ACAGACTTCG CAATGTTATA CGTCCTCGTT
CCGCCAGACG CCAAGCTAGA CCCCACCCTG TCGAAGCTAA ACGCCACTAA AATGGCCACG
ATAATACGAG GCGACTTCTC TACTATCGAC TTGTCCAAGT TTAATGTGAT CATCCTCGGA
CAACCGCCTA AGCCCCTCAG CGAGGCGGAG CTAGCCGCCT TAAAGAAATG GTTTGAGTCT
GGAGGCAAAG TGTTGTGGTG CGCCGCCGAC TCCGACTACC CAGCCCAGGG CTCGGAGGAG
TCGCAAGCCG TCTGTAACGA CATAGCTGAA TACCTAGGCG CCCACATTAG AGTCGACTAC
GTCTCAGTAG AGGATCCACA GTATAACGCA AGAGCTGGCT ATAGAGTGAT AGGCGTTGTC
GACCCGCCGC CTCAGCTGGC CTTCCTCGGC TTCCTCGCCC AGCGCGTCCT CTTCCACGGC
CCTGGCGTAA TCGCCGTAGT GTTGCCCGAC GGGAGGTGGG TCCCCGCCAC AAGCCCAGAG
ACGCAGAAGG CCTACGGCAA TATCTACGTG ATAGCCAGAA CCACCGAGAG GGGCACTATA
GTTGAGCACA GGACCTCCGC CGACGGCAAA GGCAGAGATG GAAAGGCCCA CAAGGCAGGC
GACCGCGGCG TCTTCGCGCT GATGGCTGCC GAGATTATGC CAAGCGGAAG CGTGCTCATC
CTCTCCGGCG AGACGCCATA CGGCGGCTAC GAGCCCATGA CCGCCCCCAT TTACTACAGG
GTCCAACTAG ACGGGCCTAG ATTCCTAAGA AACCTCCTCC TGTGGGCCAC TGGCAACTAT
AGAGAGCTCA CGACGATGGT CTACCAAGTC CGTCAGATGG CCCAAATCAC ATCTGATGTC
TCGTCGCTTA AAAACACAGC CGCCGCGCTA CAAAACGAAG TCTCCGCCGT TAAAAACGCC
GTTTCGCAGG TATCTACTAA GGTCGACGCC GTGGGCGGCC AAGTGGCGGC TCTAAGCCAG
AAGATAGATC AACTCGCCCA ACAGCTCAAC GCCGCCGTGG CTGAGGCTAA CAACGCCAAA
ACCACAGCTT TCGTCGGCAC AGCCCTCGCC TTGATATTCG CAATAGTAGC AGCCGCGCTA
GCCCTCCGTA GAAAATGA
|
|---|
| Protein sequence | MKSKLVVVLL AAALAAAQQL YVPVLVDVAH GEATKGLDFW VNSTANPLAI TDFAMLYVLV
PPDAKLDPTL SKLNATKMAT IIRGDFSTID LSKFNVIILG QPPKPLSEAE LAALKKWFES
GGKVLWCAAD SDYPAQGSEE SQAVCNDIAE YLGAHIRVDY VSVEDPQYNA RAGYRVIGVV
DPPPQLAFLG FLAQRVLFHG PGVIAVVLPD GRWVPATSPE TQKAYGNIYV IARTTERGTI
VEHRTSADGK GRDGKAHKAG DRGVFALMAA EIMPSGSVLI LSGETPYGGY EPMTAPIYYR
VQLDGPRFLR NLLLWATGNY RELTTMVYQV RQMAQITSDV SSLKNTAAAL QNEVSAVKNA
VSQVSTKVDA VGGQVAALSQ KIDQLAQQLN AAVAEANNAK TTAFVGTALA LIFAIVAAAL
ALRRK
|
|---|
| |