Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0059 |
Symbol | |
ID | 4617439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 53569 |
End bp | 55635 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639783141 |
Product | periplasmic binding protein |
Protein accession | YP_929586 |
Protein GI | 119871579 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.932595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGGG CGGTCCTAAT CGGAGCTCTA ATCTTGGTAA CAATAGCATT TTTGTTGCAA ATCCAACAGC CGCCGCAGAA GATGCAAGAG ACGGCGGCTA CAACGGCGAC TCCTCCTTTG AAGTCTCCGG AGGCGGCGGC ACCCGGCGCC ACGGCGACTA AAGCGTGCTC GGGCTCGCCT CTTGGGTACG TGGCGCCTAC GTTGGTTAAG GTGGTTAAAG ACGCGGCGGC GGCTGCGGGC CTCGGCACGG AGGGGATACA GTCTGTGGGG TCTGTGGAGG GGCTTAGGAG GATACAGGGC GGCGCCAAGC CGGACCTCTT CGGGTCGGTG GATATAGAGC TGAGGCCAGA CGCCGAGAGG GCGGGAGCCC TCCAGACCTA CTCTCTGGGG AGGTTCAAGC TGGCCCTCGT CTGCAGAGCC CCCACGACGC TTGAGGAGCT GGCCTCCGCC AAGACGGTCT TCCCGGACCC CAACAAGGCC CCTATCGGCT ATAGGGAGCT CGCCGCCGCG TGGATGCTGT CTCGGGACCT CGGCGTCAAC CTCACGGCGA AGTACACCGC CCTGGGGGTG AGGTTTGTAT ACAACGGCAC TCTCTACGTC TACATACCCA GCTCCCTCCC CAACACCGAG GCGGTAGACG TGGCCCCCAA CCTAGACGGC TCCTGGGCTA AGTTCGAGGC GGGGGCGGGC CGCTGCATGT TCGCCTACGT CCCCTTCCTC CTCGGCAAAG GCCTCCAGCT TAGGCCCGCC GGCGGCGGCA CCAGCTACTG GGAGCCATAC ACGGCCGAGG CGGGCGGGAG GACCTACTAC GTGTACGTCT TCAAGCCGCC CTACGACTTC GCCGAGGACC CGCCCATCAA AGCCGTGGCC GTCCTCCTCG GCCCGCCGGT CAAAACTATA AGGGTGGGCC ACTTCGAGGC CTTTGTGGCC TCCTACACGG AGCTGGGCAA CTGCGTCATA GAGTCACTGA AGAAGATGGA TTTGTCGAAG TACGGGTTTA TAACCACGGC CCGGGCTACG GCCGGCGCGT CTAAGTCAGC TGTTGTAGAG GTGGTGGATG TGTTGGGGCG GCGGGTGTCT GTGAAGGCGC CTGTGTCTAG AGTTGTGGCT TTGGGGCCGG GGGCGCTTAG GCTCGTGGTA TATCTCAACG CCACAGACAA ACTAGCCGGG ATAGAAGAGA TAGAGAAGAG GCCACCGCGG GGTAGAGACT ACGGCTACAT CCTCTGGACA AAAAACCTCA CCTCGCTCCC AGTGGTTGGG CGGGGTGGGC CTGGTAGCCC TGTTGACTAC GAGAGGATAC TATCTGTGAG GCCGGACGTG ATTATCATGT CGCCTTTAGT GGCCGACGCC CCCGACAAGA TCCAGGAGAA AACCGGCATA CCCGTGGTGG TTGTGTCGGC TTTTATCGAC AGCGGCGAGG GCTGGGTCAA CTTCACTAGT TTGTACAAGT CTCTTAGGAC CGTCGGCGTT TTGTTGGGTA GAGAGGAGAG GGCTGAGGAG CTGGTTAGAT ACATGGAGGG TTTGATCAAA GATCTCAAGA GGCGCACCGC CAACATAACC CAAAGGCCAA AGGTGTACGT AGGCGCAATC TCTTACAAAG GCGGCCAGCC CTTTGAAGCG ACTCAGTCGT ACTTCCCCCC TCTGGTCTTG CTGAACACGC CGGGGGTCGC AGATAGATAT GGAATAAAAG GGGTCGCTAA GATCGACTGG GAGGCGCTCT TGAAGGAGCA GCCTGACGTG ATCTTCATCG ACTTGGGGAA CTACATGTTT GTAGTGCAGG ACTTTAACAA GAGCCGGGAT AAGTACTGCG CTCTTAAGGC CTTTAGAGAG GGGAGGGTAT ACGGCATTTT GATGTACAAC TGGTATGGAA CCAATATCGC TACGCTTTTT GCTGACGCCT ATTTTATGGG TAAGGTGCTT TATCCTGAGG CGTTTAGGGA TGTGGATCCT GTGGCTAAGG CTGACGAGAT CTATAGGGAG TTCCTCGGCA CGCCCCTCTA CACGGCAATA GCCAAAGACT TCAAAGGAGG ATTTAGACAG CTGACAGAAT TCAAATGCGG GTCCTGA
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Protein sequence | MRRAVLIGAL ILVTIAFLLQ IQQPPQKMQE TAATTATPPL KSPEAAAPGA TATKACSGSP LGYVAPTLVK VVKDAAAAAG LGTEGIQSVG SVEGLRRIQG GAKPDLFGSV DIELRPDAER AGALQTYSLG RFKLALVCRA PTTLEELASA KTVFPDPNKA PIGYRELAAA WMLSRDLGVN LTAKYTALGV RFVYNGTLYV YIPSSLPNTE AVDVAPNLDG SWAKFEAGAG RCMFAYVPFL LGKGLQLRPA GGGTSYWEPY TAEAGGRTYY VYVFKPPYDF AEDPPIKAVA VLLGPPVKTI RVGHFEAFVA SYTELGNCVI ESLKKMDLSK YGFITTARAT AGASKSAVVE VVDVLGRRVS VKAPVSRVVA LGPGALRLVV YLNATDKLAG IEEIEKRPPR GRDYGYILWT KNLTSLPVVG RGGPGSPVDY ERILSVRPDV IIMSPLVADA PDKIQEKTGI PVVVVSAFID SGEGWVNFTS LYKSLRTVGV LLGREERAEE LVRYMEGLIK DLKRRTANIT QRPKVYVGAI SYKGGQPFEA TQSYFPPLVL LNTPGVADRY GIKGVAKIDW EALLKEQPDV IFIDLGNYMF VVQDFNKSRD KYCALKAFRE GRVYGILMYN WYGTNIATLF ADAYFMGKVL YPEAFRDVDP VAKADEIYRE FLGTPLYTAI AKDFKGGFRQ LTEFKCGS
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